RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 ST3GAL6Q9Y274 331 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 TRAV38-1A0A0B4J264 116 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 TRAV40A0A0B4J280 105 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 LINC00854A0A1B0GVQ3 168 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 MDFIC2A0A1B0GVS7 189 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 MEIOCA2RUB1 952 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 FAM90A10PA6NDY2 464 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 FAM90A18PA6NE21 464 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 FAM90A16PA6NEW6 464 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 FAM90A20PA6NIJ5 464 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 FAM90A8PA6NJQ4 464 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 FAM90A7PA6NKC0 464 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 FAM90A22PA8MWA6 464 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 FAM90A12PA8MX19 464 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 FAM90A5PA8MXJ8 464 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 FAM90A23PA8MXZ1 464 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 SRRM5B3KS81 715 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 F8VVB4 439 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 F8VWA3 439 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 GEMIN2O14893 280 aaKnown RBP9.52□□□□□ -0.89
LINC00539-204ENST00000608957 LPLP06858 475 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 MELTFP08582 738 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 ACAA1P09110 424 aaPredicted RBP9.52□□□□□ -0.89
LINC00539-204ENST00000608957 FAM90A15PP0C7V4 464 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 FAM90A13PP0C7W8 464 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 FAM90A14PP0C7W9 464 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 FAM90A24PP0C7X0 464 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 PPIAL4GP0DN37 164 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 SELLP14151 372 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 MMP9P14780 707 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 GNB3P16520 340 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 PRKACAP17612 351 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 BLVRBP30043 206 aaPredicted RBP9.52□□□□□ -0.89
LINC00539-204ENST00000608957 CFHR2P36980 270 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 GDNFP39905 211 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 TMEM50BP56557 158 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 GUCA2AQ02747 115 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 ASAH1Q13510 395 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 IL13RA2Q14627 380 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 ARL6IP1Q15041 203 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 PNLIPRP3Q17RR3 467 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 MPV17LQ2QL34 196 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 CDNFQ49AH0 187 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 NKAPLQ5M9Q1 402 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 BTNL3Q6UXE8 466 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 LINC00596Q86U02 117 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 RTN4RL2Q86UN3 420 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 FAM58AQ8N1B3 248 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 POC1AQ8NBT0 407 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 GPX8Q8TED1 209 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 FAM216AQ8WUB2 273 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 ARHGAP5-AS1Q96IT6 56 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 DUX5Q96PT3 197 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 NRIP2Q9BQI9 281 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 PECRQ9BY49 303 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 WDR13Q9H1Z4 485 aa9.52□□□□□ -0.89
LINC00539-204ENST00000608957 RBMX2Q9Y388 322 aaKnown RBP9.52□□□□□ -0.89
LINC00539-204ENST00000608957 TMEM89A2RUT3 159 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 TRIM77I1YAP6 450 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 DVL1O14640 695 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 NOS1APO75052 506 aaPredicted RBP9.51□□□□□ -0.89
LINC00539-204ENST00000608957 PDCD6O75340 191 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 NXPH2O95156 264 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 PTTG1O95997 202 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 FPR2P25090 351 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 CHATP28329 748 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 NPY4RP50391 375 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 SNU13P55769 128 aaKnown RBP9.51□□□□□ -0.89
LINC00539-204ENST00000608957 GNG2P59768 71 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 ACTBP60709 375 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 GMFBP60983 142 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 ERVK11-1P61568 191 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 ACTG1P63261 375 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 SSBP1Q04837 148 aaKnown RBP9.51□□□□□ -0.89
LINC00539-204ENST00000608957 KLF9Q13886 244 aaPredicted RBP9.51□□□□□ -0.89
LINC00539-204ENST00000608957 KCNJ8Q15842 424 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 SIGIRRQ6IA17 410 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 FIP1L1Q6UN15 594 aaKnown RBP9.51□□□□□ -0.89
LINC00539-204ENST00000608957 C9orf139Q6ZV77 190 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 TOMM5Q8N4H5 51 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 FAM216BQ8N7L0 139 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 MINDY2Q8NBR6 621 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 OR10Z1Q8NGY1 313 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 CHPT1Q8WUD6 406 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 NUDCD2Q8WVJ2 157 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 ST8SIA4Q92187 359 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 TBX15Q96SF7 602 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 CCL13Q99616 98 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 IL36RNQ9UBH0 155 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 KAAG1Q9UBP8 84 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 MTFP1Q9UDX5 166 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 ELF5Q9UKW6 265 aaPredicted RBP9.51□□□□□ -0.89
LINC00539-204ENST00000608957 HSF4Q9ULV5 492 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 KCNK7Q9Y2U2 307 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 FBN3Q75N90 2809 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 TENM1Q9UKZ4 2725 aa9.51□□□□□ -0.89
LINC00539-204ENST00000608957 MEIS3P1A6NDR6 274 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 DNAJC9-AS1A6NH13 148 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 SERPINE3A8MV23 424 aa9.5□□□□□ -0.89
LINC00539-204ENST00000608957 PLA2G10O15496 165 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms