RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 RPS11P62280 158 aaKnown RBP eCLIP7.67□□□□□ -1.18
COMMD3-215ENST00000602574 SMAD3P84022 425 aaKnown RBP7.67□□□□□ -1.18
COMMD3-215ENST00000602574 C9orf57Q5W0N0 161 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 SIGLECL1Q8N7X8 197 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 OR4K13Q8NH42 304 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 OR4A5Q8NH83 315 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 C16orf52Q8NHV5 167 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 FAM213BQ8TBF2 198 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 C2orf15Q8WU43 125 aaKnown RBP7.67□□□□□ -1.18
COMMD3-215ENST00000602574 ZNF296Q8WUU4 475 aaPredicted RBP7.67□□□□□ -1.18
COMMD3-215ENST00000602574 NRTNQ99748 197 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 C1QTNF4Q9BXJ3 329 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 TMEM133Q9H2Q1 129 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 GREB1Q4ZG55 1949 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 CENPVL3A0A0U1RRI6 287 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 MYADML2A6NDP7 307 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 TMEM212A6NML5 194 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 CEACAM18A8MTB9 384 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 ZNF878C9JN71 531 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 C15orf65H3BRN8 121 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 ZIC2O95409 532 aaPredicted RBP7.67□□□□□ -1.18
COMMD3-215ENST00000602574 KLKB1P03952 638 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 ADH4P08319 380 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 IRF1P10914 325 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 TNFRSF1AP19438 455 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 OPRM1P35372 400 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 STC1P52823 247 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 TMPRSS3P57727 454 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 GRB2P62993 217 aaKnown RBP7.67□□□□□ -1.18
COMMD3-215ENST00000602574 HLA-BQ31612 363 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 MPV17L2Q567V2 206 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 TMEM78Q5T7P6 136 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 TRIM40Q6P9F5 258 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 SBSNQ6UWP8 590 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 C8orf86Q6ZUL3 223 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 B3GALNT2Q8NCR0 500 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 OR2K2Q8NGT1 345 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 NEU4Q8WWR8 484 aaPredicted RBP7.67□□□□□ -1.18
COMMD3-215ENST00000602574 MAL2Q969L2 176 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 MS4A4AQ96JQ5 239 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 SDF2Q99470 211 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 ULBP2Q9BZM5 246 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 ZNF443Q9Y2A4 671 aaPredicted RBP7.67□□□□□ -1.18
COMMD3-215ENST00000602574 TRAPPC1Q9Y5R8 145 aa7.67□□□□□ -1.18
COMMD3-215ENST00000602574 HEATR5AQ86XA9 2040 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 NKX2-8O15522 239 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 GPR137BO60478 399 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 DEDDO75618 318 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 GPX1P07203 203 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 CRYGBP07316 175 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 NGFRP08138 427 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 ZNF708P17019 499 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 AADACP22760 399 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 EDNRAP25101 427 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 NPY1RP25929 384 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 KIR2DL2P43627 348 aaPredicted RBP7.66□□□□□ -1.18
COMMD3-215ENST00000602574 GGTA1PQ4G0N0 100 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 GLB1LQ6UWU2 654 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 TMEM150AQ86TG1 271 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 TMEM86AQ8N2M4 240 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 MORN4Q8NDC4 146 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 OR51T1Q8NGJ9 327 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 CXorf40BQ96DE9 158 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 TM2D1Q9BX74 207 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 IL36GQ9NZH8 169 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 RALYQ9UKM9 306 aaKnown RBP7.66□□□□□ -1.18
COMMD3-215ENST00000602574 TP53TG3Q9ULZ0 132 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 TRAV9-1A0A075B6T8 112 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 DPRXA6NFQ7 191 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 FAM72CH0Y354 149 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 XRCC2O43543 280 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 B3GALT4O96024 378 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 IGLV3-25P01717 112 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 CD33P20138 364 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 SLC6A6P31641 620 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 WASP42768 502 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 ZXDAP98168 799 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 OR1Q1Q15612 314 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 FAM72AQ5TYM5 149 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 STUMQ69YW2 141 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 FAM72DQ6L9T8 149 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 MOB1BQ7L9L4 216 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 H2BFWTQ7Z2G1 175 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 FAM72BQ86X60 149 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 SGPP2Q8IWX5 399 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 CLDN19Q8N6F1 224 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 TMEM99Q8N816 258 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 FADS6Q8N9I5 356 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 OR2G3Q8NGZ4 309 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 SLC38A5Q8WUX1 472 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 AP1S3Q96PC3 154 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 SAMD10Q9BYL1 202 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 PLA2G12AQ9BZM1 189 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 PPDPFQ9H3Y8 114 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 GPR84Q9NQS5 396 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 KLHDC2Q9Y2U9 406 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 WASHC3Q9Y3C0 194 aa7.66□□□□□ -1.18
COMMD3-215ENST00000602574 MUC21A0A0G2JKD1 596 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 MUC21A0A140T8X8 626 aa7.65□□□□□ -1.18
COMMD3-215ENST00000602574 C17orf102A2RUQ5 167 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms