RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 SUMF2Q8NBJ7 301 aa18.11■□□□□ 0.49
SSBP4-209ENST00000601357 FBLIM1Q8WUP2 373 aa18.11■□□□□ 0.49
SSBP4-209ENST00000601357 DPCDQ9BVM2 203 aaPredicted RBP18.11■□□□□ 0.49
SSBP4-209ENST00000601357 MMP28Q9H239 520 aa18.11■□□□□ 0.49
SSBP4-209ENST00000601357 CHCHD3Q9NX63 227 aaKnown RBP18.11■□□□□ 0.49
SSBP4-209ENST00000601357 CNOT2Q9NZN8 540 aaKnown RBP18.11■□□□□ 0.49
SSBP4-209ENST00000601357 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.11■□□□□ 0.49
SSBP4-209ENST00000601357 ING4Q9UNL4 249 aa18.11■□□□□ 0.49
SSBP4-209ENST00000601357 TRAV8-7A0A075B6U6 113 aa18.1■□□□□ 0.49
SSBP4-209ENST00000601357 MAGEA13PA6NCF6 341 aa18.1■□□□□ 0.49
SSBP4-209ENST00000601357 CASQ2O14958 399 aaPredicted RBP18.1■□□□□ 0.49
SSBP4-209ENST00000601357 FSTP19883 344 aa18.1■□□□□ 0.49
SSBP4-209ENST00000601357 CAPGP40121 348 aa18.1■□□□□ 0.49
SSBP4-209ENST00000601357 VDAC2P45880 294 aaPredicted RBP18.1■□□□□ 0.49
SSBP4-209ENST00000601357 OGFRL1Q5TC84 451 aaPredicted RBP18.1■□□□□ 0.49
SSBP4-209ENST00000601357 LINC00596Q86U02 117 aa18.1■□□□□ 0.49
SSBP4-209ENST00000601357 C1QL4Q86Z23 238 aa18.1■□□□□ 0.49
SSBP4-209ENST00000601357 LYG1Q8N1E2 194 aa18.1■□□□□ 0.49
SSBP4-209ENST00000601357 ZFP41Q8N8Y5 198 aa18.1■□□□□ 0.49
SSBP4-209ENST00000601357 AKR1E2Q96JD6 320 aa18.1■□□□□ 0.49
SSBP4-209ENST00000601357 RBM14Q96PK6 669 aaKnown RBP18.1■□□□□ 0.49
SSBP4-209ENST00000601357 OR5M11Q96RB7 305 aa18.1■□□□□ 0.49
SSBP4-209ENST00000601357 ZNF184Q99676 751 aaPredicted RBP18.1■□□□□ 0.49
SSBP4-209ENST00000601357 IDI2-AS1Q9NZ38 188 aa18.1■□□□□ 0.49
SSBP4-209ENST00000601357 TRBV5-7A0A0A0MS05 114 aa18.09■□□□□ 0.49
SSBP4-209ENST00000601357 EFCAB10A6NFE3 127 aa18.09■□□□□ 0.49
SSBP4-209ENST00000601357 J3QR06 171 aa18.09■□□□□ 0.49
SSBP4-209ENST00000601357 GEMIN2O14893 280 aaKnown RBP18.09■□□□□ 0.49
SSBP4-209ENST00000601357 OR2F2O95006 317 aa18.09■□□□□ 0.49
SSBP4-209ENST00000601357 CSTBP04080 98 aaKnown RBP18.09■□□□□ 0.49
SSBP4-209ENST00000601357 AMY1AP04745 511 aa18.09■□□□□ 0.49
SSBP4-209ENST00000601357 AMY2AP04746 511 aa18.09■□□□□ 0.49
SSBP4-209ENST00000601357 RBM39Q14498 530 aaKnown RBP18.09■□□□□ 0.49
SSBP4-209ENST00000601357 CCDC144NLQ6NUI1 221 aa18.09■□□□□ 0.49
SSBP4-209ENST00000601357 NDUFA11Q86Y39 141 aa18.09■□□□□ 0.49
SSBP4-209ENST00000601357 C8orf59Q8N0T1 100 aaPredicted RBP18.09■□□□□ 0.49
SSBP4-209ENST00000601357 OR10A7Q8NGE5 316 aa18.09■□□□□ 0.49
SSBP4-209ENST00000601357 CITED2Q99967 270 aaPredicted RBP18.09■□□□□ 0.49
SSBP4-209ENST00000601357 SLC25A33Q9BSK2 321 aa18.09■□□□□ 0.49
SSBP4-209ENST00000601357 PLCXD1Q9NUJ7 323 aa18.09■□□□□ 0.49
SSBP4-209ENST00000601357 PAK1IP1Q9NWT1 392 aaPredicted RBP18.09■□□□□ 0.49
SSBP4-209ENST00000601357 PSORS1C1Q9UIG5 152 aa18.09■□□□□ 0.49
SSBP4-209ENST00000601357 XPNPEP2O43895 674 aa18.08■□□□□ 0.48
SSBP4-209ENST00000601357 ZNF780AO75290 641 aaPredicted RBP18.08■□□□□ 0.48
SSBP4-209ENST00000601357 OR7C1O76099 320 aaPredicted RBP18.08■□□□□ 0.48
SSBP4-209ENST00000601357 SERPINA2P20848 420 aa18.08■□□□□ 0.48
SSBP4-209ENST00000601357 SSTR5P35346 364 aa18.08■□□□□ 0.48
SSBP4-209ENST00000601357 DOC2BQ14184 412 aa18.08■□□□□ 0.48
SSBP4-209ENST00000601357 MPV17LQ2QL34 196 aa18.08■□□□□ 0.48
SSBP4-209ENST00000601357 SLC16A12Q6ZSM3 486 aa18.08■□□□□ 0.48
SSBP4-209ENST00000601357 MRGPRDQ8TDS7 321 aa18.08■□□□□ 0.48
SSBP4-209ENST00000601357 LEAP2Q969E1 77 aa18.08■□□□□ 0.48
SSBP4-209ENST00000601357 CKLFQ9UBR5 152 aa18.08■□□□□ 0.48
SSBP4-209ENST00000601357 PSG11Q9UQ72 335 aa18.08■□□□□ 0.48
SSBP4-209ENST00000601357 PLXNB1O43157 2135 aa18.08■□□□□ 0.48
SSBP4-209ENST00000601357 A0A1W2PP11 408 aa18.07■□□□□ 0.48
SSBP4-209ENST00000601357 FAM90A18PA6NE21 464 aa18.07■□□□□ 0.48
SSBP4-209ENST00000601357 FAM90A16PA6NEW6 464 aa18.07■□□□□ 0.48
SSBP4-209ENST00000601357 FAM90A20PA6NIJ5 464 aa18.07■□□□□ 0.48
SSBP4-209ENST00000601357 FAM90A9PA6NNJ1 464 aa18.07■□□□□ 0.48
SSBP4-209ENST00000601357 FAM90A12PA8MX19 464 aa18.07■□□□□ 0.48
SSBP4-209ENST00000601357 FAM90A5PA8MXJ8 464 aa18.07■□□□□ 0.48
SSBP4-209ENST00000601357 PEX14O75381 377 aa18.07■□□□□ 0.48
SSBP4-209ENST00000601357 FAM90A15PP0C7V4 464 aa18.07■□□□□ 0.48
SSBP4-209ENST00000601357 FAM90A13PP0C7W8 464 aa18.07■□□□□ 0.48
SSBP4-209ENST00000601357 FAM90A14PP0C7W9 464 aa18.07■□□□□ 0.48
SSBP4-209ENST00000601357 FAM90A24PP0C7X0 464 aa18.07■□□□□ 0.48
SSBP4-209ENST00000601357 MNDAP41218 407 aa18.07■□□□□ 0.48
SSBP4-209ENST00000601357 TAS2R43P59537 309 aa18.07■□□□□ 0.48
SSBP4-209ENST00000601357 EMX1Q04741 257 aaPredicted RBP18.07■□□□□ 0.48
SSBP4-209ENST00000601357 NSUN5P1Q3KNT7 163 aa18.07■□□□□ 0.48
SSBP4-209ENST00000601357 ARSJQ5FYB0 599 aaPredicted RBP18.07■□□□□ 0.48
SSBP4-209ENST00000601357 RFESDQ8TAC1 157 aa18.07■□□□□ 0.48
SSBP4-209ENST00000601357 OR14A2Q96R54 314 aa18.07■□□□□ 0.48
SSBP4-209ENST00000601357 S100A13Q99584 98 aa18.07■□□□□ 0.48
SSBP4-209ENST00000601357 PCDHB16Q9NRJ7 776 aa18.07■□□□□ 0.48
SSBP4-209ENST00000601357 AMMECR1Q9Y4X0 333 aaPredicted RBP18.07■□□□□ 0.48
SSBP4-209ENST00000601357 TRAV39A0A0B4J263 110 aa18.06■□□□□ 0.48
SSBP4-209ENST00000601357 G3V4G9 280 aa18.06■□□□□ 0.48
SSBP4-209ENST00000601357 CD1AP06126 327 aa18.06■□□□□ 0.48
SSBP4-209ENST00000601357 GTF2F2P13984 249 aa18.06■□□□□ 0.48
SSBP4-209ENST00000601357 BEAN1Q3B7T3 259 aa18.06■□□□□ 0.48
SSBP4-209ENST00000601357 SLC22A6Q4U2R8 563 aa18.06■□□□□ 0.48
SSBP4-209ENST00000601357 KPRPQ5T749 579 aaPredicted RBP18.06■□□□□ 0.48
SSBP4-209ENST00000601357 SAMD5Q5TGI4 173 aa18.06■□□□□ 0.48
SSBP4-209ENST00000601357 LYPD6Q86Y78 171 aa18.06■□□□□ 0.48
SSBP4-209ENST00000601357 TOMM40LQ969M1 308 aa18.06■□□□□ 0.48
SSBP4-209ENST00000601357 RPEQ96AT9 228 aa18.06■□□□□ 0.48
SSBP4-209ENST00000601357 FKBP14Q9NWM8 211 aa18.06■□□□□ 0.48
SSBP4-209ENST00000601357 A0A1W2PPI3 338 aa18.05■□□□□ 0.48
SSBP4-209ENST00000601357 IGHV3-7P01780 117 aa18.05■□□□□ 0.48
SSBP4-209ENST00000601357 GZMHP20718 246 aa18.05■□□□□ 0.48
SSBP4-209ENST00000601357 WNT4P56705 351 aa18.05■□□□□ 0.48
SSBP4-209ENST00000601357 CD83Q01151 205 aa18.05■□□□□ 0.48
SSBP4-209ENST00000601357 GPR176Q14439 515 aa18.05■□□□□ 0.48
SSBP4-209ENST00000601357 ABCA11PQ4W5N1 156 aa18.05■□□□□ 0.48
SSBP4-209ENST00000601357 AHSA2Q719I0 299 aa18.05■□□□□ 0.48
SSBP4-209ENST00000601357 THNSL2Q86YJ6 484 aa18.05■□□□□ 0.48
SSBP4-209ENST00000601357 CDH26Q8IXH8 852 aa18.05■□□□□ 0.48
SSBP4-209ENST00000601357 CAPSLQ8WWF8 208 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms