RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 SLC2A8Q9NY64 477 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 EHFQ9NZC4 300 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 DNAJB11Q9UBS4 358 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 ANXA10Q9UJ72 324 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 HIVEP2P31629 2446 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 IGKV1D-8A0A087WSZ0 117 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 SRRM5B3KS81 715 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 B9A039 149 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 RLN1P04808 185 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 CD55P08174 381 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 ADH4P08319 380 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 IRF2P14316 349 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 EGR1P18146 543 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 TNFRSF1AP19438 455 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 CFHR2P36980 270 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 CCL8P80075 99 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 TMEM17Q86X19 198 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 ARRDC1Q8N5I2 433 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 GCSAMQ8N6F7 178 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 EGLN1Q9GZT9 426 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 RIMS4Q9H426 269 aaPredicted RBP10.54□□□□□ -0.72
SRSF1-204ENST00000581979 GCM1Q9NP62 436 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 DECR2Q9NUI1 292 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 RNF7Q9UBF6 113 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 NPTNQ9Y639 398 aa10.54□□□□□ -0.72
SRSF1-204ENST00000581979 RFPL4AA6NLU0 287 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 RFPL4AL1F8VTS6 287 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 SDCBPO00560 298 aaPredicted RBP10.53□□□□□ -0.72
SRSF1-204ENST00000581979 PRAF2O60831 178 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 RBMXP38159 391 aaKnown RBP10.53□□□□□ -0.72
SRSF1-204ENST00000581979 CDKN1AP38936 164 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 CBX3Q13185 183 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 CLEC12BQ2HXU8 276 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 ZCCHC24Q8N2G6 241 aaKnown RBP10.53□□□□□ -0.72
SRSF1-204ENST00000581979 OR13C8Q8NGS7 320 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 MS4A5Q9H3V2 200 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 NECAP2Q9NVZ3 263 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 ING3Q9NXR8 418 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 TREM2Q9NZC2 230 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 PPP1R3CQ9UQK1 317 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 WIPI2Q9Y4P8 454 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 A0A0A6YYJ9 748 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 HMX3A6NHT5 357 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 NAPSAO96009 420 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 IGHV4-39P01824 125 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 ANXA7P20073 488 aaKnown RBP10.53□□□□□ -0.72
SRSF1-204ENST00000581979 SNRPD2P62316 118 aaKnown RBP10.53□□□□□ -0.72
SRSF1-204ENST00000581979 ATXN7L3Q14CW9 347 aaPredicted RBP10.53□□□□□ -0.72
SRSF1-204ENST00000581979 GRK1Q15835 563 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 FAM209AQ5JX71 171 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 OVCH2Q7RTZ1 564 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 ZNF554Q86TJ5 538 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 AKAP14Q86UN6 197 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 FAM90A1Q86YD7 464 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 MUC15Q8N387 334 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 Q8TCH9 128 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 CHAC2Q8WUX2 184 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 HPS1Q92902 700 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 NEURL2Q9BR09 285 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 SAP30LQ9HAJ7 183 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 Q9N2K0 584 aa10.53□□□□□ -0.72
SRSF1-204ENST00000581979 IGHV3OR15-7A0A075B7D8 119 aa10.52□□□□□ -0.73
SRSF1-204ENST00000581979 TMEM82A0PJX8 343 aa10.52□□□□□ -0.73
SRSF1-204ENST00000581979 C7orf66A4D0T2 115 aa10.52□□□□□ -0.73
SRSF1-204ENST00000581979 IFNL4K9M1U5 179 aa10.52□□□□□ -0.73
SRSF1-204ENST00000581979 CYB5R3P00387 301 aaPredicted RBP10.52□□□□□ -0.73
SRSF1-204ENST00000581979 LHBP01229 141 aa10.52□□□□□ -0.73
SRSF1-204ENST00000581979 LMO1P25800 156 aa10.52□□□□□ -0.73
SRSF1-204ENST00000581979 CD80P33681 288 aa10.52□□□□□ -0.73
SRSF1-204ENST00000581979 GABRA2P47869 451 aa10.52□□□□□ -0.73
SRSF1-204ENST00000581979 COL10A1Q03692 680 aa10.52□□□□□ -0.73
SRSF1-204ENST00000581979 SRSF7Q16629 238 aaKnown RBP eCLIP10.52□□□□□ -0.73
SRSF1-204ENST00000581979 MST1LQ2TV78 715 aa10.52□□□□□ -0.73
SRSF1-204ENST00000581979 C11orf71Q6IPW1 123 aa10.52□□□□□ -0.73
SRSF1-204ENST00000581979 Q6ZPA2 131 aa10.52□□□□□ -0.73
SRSF1-204ENST00000581979 TMED4Q7Z7H5 227 aa10.52□□□□□ -0.73
SRSF1-204ENST00000581979 OR5T2Q8NGG2 359 aa10.52□□□□□ -0.73
SRSF1-204ENST00000581979 PLPPR1Q8TBJ4 325 aa10.52□□□□□ -0.73
SRSF1-204ENST00000581979 MRPL30Q8TCC3 161 aaKnown RBP10.52□□□□□ -0.73
SRSF1-204ENST00000581979 PPP1R14BQ96C90 147 aa10.52□□□□□ -0.73
SRSF1-204ENST00000581979 BARX1Q9HBU1 254 aaPredicted RBP10.52□□□□□ -0.73
SRSF1-204ENST00000581979 TMEM165Q9HC07 324 aa10.52□□□□□ -0.73
SRSF1-204ENST00000581979 DYSFO75923 2080 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 TRBV6-6A0A0A6YYG2 114 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 KIR2DS1A0A191URI9 304 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 LRRC30A6NM36 301 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 OR2AT4A6NND4 320 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.51□□□□□ -0.73
SRSF1-204ENST00000581979 TFF1P04155 84 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 GSTT2P0CG29 244 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 OR5H8P0DN80 308 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 PSG2P11465 335 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 PRDX2P32119 198 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 KIR2DS4P43632 304 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 MECP2P51608 486 aaKnown RBP10.51□□□□□ -0.73
SRSF1-204ENST00000581979 KIR2DS1Q14954 304 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 METTL11BQ5VVY1 283 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 GLDNQ6ZMI3 551 aaPredicted RBP10.51□□□□□ -0.73
SRSF1-204ENST00000581979 ZDHHC22Q8N966 263 aa10.51□□□□□ -0.73
SRSF1-204ENST00000581979 OR6F1Q8NGZ6 308 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms