RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 PAN3Q58A45 887 aaKnown RBP4.57□□□□□ -1.68
SF3B3-213ENST00000569687 GPR157Q5UAW9 335 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 MBNL2Q5VZF2 373 aaKnown RBP4.57□□□□□ -1.68
SF3B3-213ENST00000569687 GGNBP1Q5YKI7 109 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 ZNF324BQ6AW86 544 aaPredicted RBP4.57□□□□□ -1.68
SF3B3-213ENST00000569687 THOC7Q6I9Y2 204 aaKnown RBP4.57□□□□□ -1.68
SF3B3-213ENST00000569687 PCSK4Q6UW60 755 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 BEND4Q6ZU67 534 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 SEM1Q6ZVN7 128 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 HSD17B13Q7Z5P4 300 aaPredicted RBP4.57□□□□□ -1.68
SF3B3-213ENST00000569687 COMMD7Q86VX2 200 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 C11orf53Q8IXP5 236 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 LGI3Q8N145 548 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 RBMXL3Q8N7X1 1067 aaKnown RBP4.57□□□□□ -1.68
SF3B3-213ENST00000569687 ZNF610Q8N9Z0 462 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 SUMF2Q8NBJ7 301 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 SCCPDHQ8NBX0 429 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 OR8G5Q8NG78 346 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 OR4A4PQ8NGN8 299 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 LILRB1Q8NHL6 650 aaPredicted RBP4.57□□□□□ -1.68
SF3B3-213ENST00000569687 SLC25A40Q8TBP6 338 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 MRPL30Q8TCC3 161 aaKnown RBP4.57□□□□□ -1.68
SF3B3-213ENST00000569687 KLF14Q8TD94 323 aaPredicted RBP4.57□□□□□ -1.68
SF3B3-213ENST00000569687 GLYATL2Q8WU03 294 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 RTN4IP1Q8WWV3 396 aaPredicted RBP4.57□□□□□ -1.68
SF3B3-213ENST00000569687 DYRK2Q92630 601 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 RBPMSQ93062 196 aaKnown RBP4.57□□□□□ -1.68
SF3B3-213ENST00000569687 RRNAD1Q96FB5 475 aaKnown RBP4.57□□□□□ -1.68
SF3B3-213ENST00000569687 DMRTA2Q96SC8 542 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 NRIP2Q9BQI9 281 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 BCL2L14Q9BZR8 327 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 OR2J1Q9GZK6 312 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 TLNRD1Q9H1K6 362 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 PLEKHA2Q9HB19 425 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 HES4Q9HCC6 221 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 SLC2A9Q9NRM0 540 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 DUX4Q9UBX2 424 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 PROCRQ9UNN8 238 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 POLDIP2Q9Y2S7 368 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 AMDHD2Q9Y303 409 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 TMED3Q9Y3Q3 217 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 WIPI2Q9Y4P8 454 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 RIF1Q5UIP0 2472 aaKnown RBP4.57□□□□□ -1.68
SF3B3-213ENST00000569687 FAM186AA6NE01 2351 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 AKAP13Q12802 2813 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 DNAJC13O75165 2243 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 IGKV1-6A0A0C4DH72 117 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-213ENST00000569687 DUXBA0A1W2PPF3 345 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 hCG_1807616A0A1W2PRN6 198 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 CLEC18AA5D8T8 446 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 OR5H1A6NKK0 313 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 MPTX1A8MV57 137 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 NUDT19A8MXV4 375 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 F5H0A9 414 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-213ENST00000569687 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-213ENST00000569687 GPR31O00270 319 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 SH2D1BO14796 132 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 ZNHIT1O43257 154 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 LYZL6O75951 148 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 CDS2O95674 445 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 PTBP3O95758 552 aaKnown RBP4.56□□□□□ -1.68
SF3B3-213ENST00000569687 RLN2P04090 185 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 GAPDHP04406 335 aaKnown RBP4.56□□□□□ -1.68
SF3B3-213ENST00000569687 FGF2P09038 288 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 SCTP09683 121 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 PRKACAP17612 351 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 M6PRP20645 277 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 CFHR2P36980 270 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 EIF5AP63241 154 aaKnown RBP4.56□□□□□ -1.68
SF3B3-213ENST00000569687 MZT1Q08AG7 82 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 FOXF2Q12947 444 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 RAB32Q13637 225 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 IAH1Q2TAA2 248 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-213ENST00000569687 ZNF718Q3SXZ3 478 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 LRRC37A5PQ49AS3 106 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 IGSF11Q5DX21 431 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 SPIN3Q5JUX0 258 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 VWA1Q6PCB0 445 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 ALKAL2Q6UX46 152 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 ZNF497Q6ZNH5 498 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 MOB1BQ7L9L4 216 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 BHLHA15Q7RTS1 189 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-213ENST00000569687 WDR86Q86TI4 376 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 MYPOPQ86VE0 399 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-213ENST00000569687 CXorf67Q86X51 503 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-213ENST00000569687 BAP18Q8IXM2 172 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 H1FOOQ8IZA3 346 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-213ENST00000569687 GCNT2Q8N0V5 402 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 CNEP1R1Q8N9A8 125 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 CLEC18CQ8NCF0 446 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 OR1J1Q8NGS3 322 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 OR1S1Q8NH92 325 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 DCUN1D4Q92564 292 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 IL22RA2Q969J5 263 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 MRPL24Q96A35 216 aaKnown RBP4.56□□□□□ -1.68
SF3B3-213ENST00000569687 ABHD14BQ96IU4 210 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 PSMG3-AS1Q96PY0 264 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 CABLES2Q9BTV7 478 aa4.56□□□□□ -1.68
SF3B3-213ENST00000569687 SLC5A7Q9GZV3 580 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms