RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 A0A1W2PPI3 338 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 C15orf65H3BRN8 121 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 GEMIN2O14893 280 aaKnown RBP6.25□□□□□ -1.41
CDH3-209ENST00000569080 MAGEB3O15480 346 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 HTR3BO95264 441 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 CSF1P09603 554 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 VSIG10L2P0DP72 767 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 SERPINA2P20848 420 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 CD24P25063 80 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 GP2P55259 537 aaKnown RBP6.25□□□□□ -1.41
CDH3-209ENST00000569080 WNT4P56705 351 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 TAS2R43P59537 309 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 RSU1Q15404 277 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 MPV17LQ2QL34 196 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 PDLIM3Q53GG5 364 aaPredicted RBP6.25□□□□□ -1.41
CDH3-209ENST00000569080 Q6ZTK2 550 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 C16orf82Q7Z2V1 217 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 LINC00596Q86U02 117 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 OSR2Q8N2R0 312 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 SUMF2Q8NBJ7 301 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 OR4D6Q8NGJ1 314 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 OR9G1Q8NH87 305 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 MRGPRDQ8TDS7 321 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 NRG4Q8WWG1 115 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 SGCDQ92629 289 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 LEAP2Q969E1 77 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 NR1H4Q96RI1 486 aaPredicted RBP6.25□□□□□ -1.41
CDH3-209ENST00000569080 OCSTAMPQ9BR26 566 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 DPCDQ9BVM2 203 aaPredicted RBP6.25□□□□□ -1.41
CDH3-209ENST00000569080 METTL9Q9H1A3 318 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 MMP28Q9H239 520 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 LIN7BQ9HAP6 207 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 PAK1IP1Q9NWT1 392 aaPredicted RBP6.25□□□□□ -1.41
CDH3-209ENST00000569080 LSM2Q9Y333 95 aaKnown RBP6.25□□□□□ -1.41
CDH3-209ENST00000569080 PLXNB1O43157 2135 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 A0A1W2PPK0 400 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 FAM90A18PA6NE21 464 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 FAM90A16PA6NEW6 464 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 FAM90A20PA6NIJ5 464 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 FAM90A9PA6NNJ1 464 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 FAM90A12PA8MX19 464 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 FAM90A5PA8MXJ8 464 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 LEUTXA8MZ59 168 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 OOSP1A8MZH6 123 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 J3QR06 171 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 MYL12BO14950 172 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 ZNF780AO75290 641 aaPredicted RBP6.24□□□□□ -1.41
CDH3-209ENST00000569080 FBXO24O75426 580 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 SC5DO75845 299 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 OR7C1O76099 320 aaPredicted RBP6.24□□□□□ -1.41
CDH3-209ENST00000569080 OR2F2O95006 317 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 OPN1MWP04001 364 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 FAM90A15PP0C7V4 464 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 FAM90A13PP0C7W8 464 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 FAM90A14PP0C7W9 464 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 FAM90A24PP0C7X0 464 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 OPN1MW2P0DN77 364 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 OPN1MW3P0DN78 364 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 CD28P10747 220 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 CELP19835 753 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 AQP4P55087 323 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 MED21Q13503 144 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 DIAPH2-AS1Q14236 149 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 INSL4Q14641 139 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 IRF3Q14653 427 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 SLC22A6Q4U2R8 563 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 FAM27D1Q5T7N8 215 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 RNLSQ5VYX0 342 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 FAM53AQ6NSI3 398 aaPredicted RBP6.24□□□□□ -1.41
CDH3-209ENST00000569080 ZNF497Q6ZNH5 498 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 GAPTQ8N292 157 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 NANOGP1Q8N7R0 232 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 TMEM104Q8NE00 496 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 BPIFB6Q8NFQ5 453 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 FAM110DQ8TAY7 271 aaPredicted RBP6.24□□□□□ -1.41
CDH3-209ENST00000569080 MUL1Q969V5 352 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 RBM14Q96PK6 669 aaKnown RBP6.24□□□□□ -1.41
CDH3-209ENST00000569080 PRSS22Q9GZN4 317 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 IDI2-AS1Q9NZ38 188 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 PSG11Q9UQ72 335 aa6.24□□□□□ -1.41
CDH3-209ENST00000569080 TMEM30CPA0ZSE6 113 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 IGHV3-7P01780 117 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 CDK1P06493 297 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 GTF2F2P13984 249 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 NFYBP25208 207 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 CEACAM3P40198 252 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 VDAC2P45880 294 aaPredicted RBP6.23□□□□□ -1.41
CDH3-209ENST00000569080 LOXL3P58215 753 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 SLC35A2P78381 396 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 TCTEX1D4Q5JR98 221 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 KPRPQ5T749 579 aaPredicted RBP6.23□□□□□ -1.41
CDH3-209ENST00000569080 SAMD5Q5TGI4 173 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 SIGIRRQ6IA17 410 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 CCDC144NLQ6NUI1 221 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 GLIPR1L1Q6UWM5 242 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 LRRTM1Q86UE6 522 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 NDUFA11Q86Y39 141 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 C1QL4Q86Z23 238 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 CDH26Q8IXH8 852 aa6.23□□□□□ -1.41
CDH3-209ENST00000569080 LYG1Q8N1E2 194 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms