RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 HSD17B6O14756 317 aa12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 MITFO75030 526 aaPredicted RBP12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 RPLP1P05386 114 aaKnown RBP12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 ZNF85Q03923 595 aa12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 TP53I3Q53FA7 332 aa12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 PAN3Q58A45 887 aaKnown RBP12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 CASC10Q5T4H9 136 aa12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 LCNL1Q6ZST4 164 aa12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 ZDHHC13Q8IUH4 622 aa12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 OR8H1Q8NGG4 311 aa12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 OR5D18Q8NGL1 313 aa12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 OR13A1Q8NGR1 328 aa12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 OR13C3Q8NGS6 347 aa12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 OR13C9Q8NGT0 318 aa12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 OR2T10Q8NGZ9 312 aa12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 C4orf3Q8WVX3 66 aa12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 GABARAPL1Q9H0R8 117 aa12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 ZCCHC4Q9H5U6 513 aa12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 SCOCQ9UIL1 159 aa12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 MYRFQ9Y2G1 1151 aa12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 SMAD5-AS1Q9Y6J3 95 aa12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 IGHV1-3A0A0C4DH29 117 aa12.35□□□□□ -0.43
HERPUD1-215ENST00000568676 HTR1AP08908 422 aa12.35□□□□□ -0.43
HERPUD1-215ENST00000568676 OR5H8P0DN80 308 aa12.35□□□□□ -0.43
HERPUD1-215ENST00000568676 TMEM225BP0DP42 221 aa12.35□□□□□ -0.43
HERPUD1-215ENST00000568676 GZMHP20718 246 aa12.35□□□□□ -0.43
HERPUD1-215ENST00000568676 FHL3Q13643 280 aa12.35□□□□□ -0.43
HERPUD1-215ENST00000568676 IL13RA2Q14627 380 aa12.35□□□□□ -0.43
HERPUD1-215ENST00000568676 UTF1Q5T230 341 aa12.35□□□□□ -0.43
HERPUD1-215ENST00000568676 C8orf31Q8N9H6 132 aa12.35□□□□□ -0.43
HERPUD1-215ENST00000568676 PXT1Q8NFP0 134 aa12.35□□□□□ -0.43
HERPUD1-215ENST00000568676 OR5D14Q8NGL3 314 aa12.35□□□□□ -0.43
HERPUD1-215ENST00000568676 CNIH3Q8TBE1 160 aa12.35□□□□□ -0.43
HERPUD1-215ENST00000568676 RNF166Q96A37 237 aaPredicted RBP12.35□□□□□ -0.43
HERPUD1-215ENST00000568676 EAF1Q96JC9 268 aaPredicted RBP12.35□□□□□ -0.43
HERPUD1-215ENST00000568676 CHCHD6Q9BRQ6 235 aa12.35□□□□□ -0.43
HERPUD1-215ENST00000568676 POMPQ9Y244 141 aa12.35□□□□□ -0.43
HERPUD1-215ENST00000568676 GYG2O15488 501 aa12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 IGHG4P01861 327 aa12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 HCKP08631 526 aa12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 VDAC1P21796 283 aa12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 GNG10P50151 68 aa12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 ZP1P60852 638 aa12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 DOC2BQ14184 412 aa12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 DIAPH2-AS1Q14236 149 aa12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 KISS1Q15726 138 aa12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 ATP6AP1Q15904 470 aa12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 MOB3BQ86TA1 216 aa12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 SERPINA12Q8IW75 414 aa12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 Q8N6K4 173 aa12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 OR52M1Q8NGK5 317 aa12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 LEAP2Q969E1 77 aa12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 EME1Q96AY2 570 aa12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 MRPL48Q96GC5 212 aaKnown RBP12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 SPACA5Q96QH8 159 aa12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 RASL11BQ9BPW5 248 aa12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 FAM118AQ9NWS6 357 aa12.34□□□□□ -0.43
HERPUD1-215ENST00000568676 STAB2Q8WWQ8 2551 aa12.33□□□□□ -0.43
HERPUD1-215ENST00000568676 TRAV24A0A0B4J272 114 aa12.33□□□□□ -0.44
HERPUD1-215ENST00000568676 HSPB6O14558 160 aa12.33□□□□□ -0.44
HERPUD1-215ENST00000568676 SLC16A6O15403 523 aa12.33□□□□□ -0.44
HERPUD1-215ENST00000568676 TXNL1O43396 289 aa12.33□□□□□ -0.44
HERPUD1-215ENST00000568676 SULT1B1O43704 296 aa12.33□□□□□ -0.44
HERPUD1-215ENST00000568676 IGHV3-7P01780 117 aa12.33□□□□□ -0.44
HERPUD1-215ENST00000568676 IL3RAP26951 378 aa12.33□□□□□ -0.44
HERPUD1-215ENST00000568676 CD1BP29016 333 aa12.33□□□□□ -0.44
HERPUD1-215ENST00000568676 NANOS3P60323 173 aaKnown RBP12.33□□□□□ -0.44
HERPUD1-215ENST00000568676 DEFB136Q30KP8 78 aa12.33□□□□□ -0.44
HERPUD1-215ENST00000568676 ZNF260Q3ZCT1 412 aa12.33□□□□□ -0.44
HERPUD1-215ENST00000568676 Q3ZCU0 254 aa12.33□□□□□ -0.44
HERPUD1-215ENST00000568676 RSBN1Q5VWQ0 802 aaPredicted RBP12.33□□□□□ -0.44
HERPUD1-215ENST00000568676 LINC00311Q8N616 119 aa12.33□□□□□ -0.44
HERPUD1-215ENST00000568676 Q8N9W7 124 aa12.33□□□□□ -0.44
HERPUD1-215ENST00000568676 MRGPRDQ8TDS7 321 aa12.33□□□□□ -0.44
HERPUD1-215ENST00000568676 TRUB1Q8WWH5 349 aaKnown RBP12.33□□□□□ -0.44
HERPUD1-215ENST00000568676 ASCL2Q99929 193 aa12.33□□□□□ -0.44
HERPUD1-215ENST00000568676 DAPL1A0PJW8 107 aa12.32□□□□□ -0.44
HERPUD1-215ENST00000568676 LINC01548A6NM66 108 aa12.32□□□□□ -0.44
HERPUD1-215ENST00000568676 MOSP00540 346 aa12.32□□□□□ -0.44
HERPUD1-215ENST00000568676 IGF1P05019 195 aa12.32□□□□□ -0.44
HERPUD1-215ENST00000568676 OR8U8P0C7N1 319 aa12.32□□□□□ -0.44
HERPUD1-215ENST00000568676 PSMB8P28062 276 aa12.32□□□□□ -0.44
HERPUD1-215ENST00000568676 CFHR3Q02985 330 aa12.32□□□□□ -0.44
HERPUD1-215ENST00000568676 FAM27D1Q5T7N8 215 aa12.32□□□□□ -0.44
HERPUD1-215ENST00000568676 ZNF691Q5VV52 312 aa12.32□□□□□ -0.44
HERPUD1-215ENST00000568676 PARP16Q8N5Y8 322 aa12.32□□□□□ -0.44
HERPUD1-215ENST00000568676 OR51A4Q8NGJ6 313 aa12.32□□□□□ -0.44
HERPUD1-215ENST00000568676 RFESDQ8TAC1 157 aa12.32□□□□□ -0.44
HERPUD1-215ENST00000568676 CIB1Q99828 191 aa12.32□□□□□ -0.44
HERPUD1-215ENST00000568676 GABARAPL3Q9BY60 117 aa12.32□□□□□ -0.44
HERPUD1-215ENST00000568676 OR4C45A6NMZ5 311 aa12.31□□□□□ -0.44
HERPUD1-215ENST00000568676 MAGEB3O15480 346 aa12.31□□□□□ -0.44
HERPUD1-215ENST00000568676 FASP25445 335 aa12.31□□□□□ -0.44
HERPUD1-215ENST00000568676 SSTR5P35346 364 aa12.31□□□□□ -0.44
HERPUD1-215ENST00000568676 SOX6P35712 828 aa12.31□□□□□ -0.44
HERPUD1-215ENST00000568676 ALKBH1Q13686 389 aaKnown RBP12.31□□□□□ -0.44
HERPUD1-215ENST00000568676 LTC4SQ16873 150 aa12.31□□□□□ -0.44
HERPUD1-215ENST00000568676 ZNF429Q86V71 674 aa12.31□□□□□ -0.44
HERPUD1-215ENST00000568676 OR11H1Q8NG94 326 aa12.31□□□□□ -0.44
HERPUD1-215ENST00000568676 OR10AC1Q8NH08 325 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms