RNA–Protein interactions for RNA: ENST00000568459.5

PKM-220, Transcript of pyruvate kinase M1/2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKM, Length 1,806 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-220ENST00000568459 RBFOX3A6NFN3 312 aa12.46□□□□□ -0.42
PKM-220ENST00000568459 TGOLN2O43493 480 aa12.46□□□□□ -0.42
PKM-220ENST00000568459 RAMP1O60894 148 aa12.46□□□□□ -0.42
PKM-220ENST00000568459 OR2C1O95371 312 aa12.46□□□□□ -0.42
PKM-220ENST00000568459 AKR1C3P42330 323 aa12.46□□□□□ -0.42
PKM-220ENST00000568459 AKIRIN2Q53H80 203 aa12.46□□□□□ -0.42
PKM-220ENST00000568459 IGFL3Q6UXB1 125 aa12.46□□□□□ -0.42
PKM-220ENST00000568459 RBMXL1Q96E39 390 aaKnown RBP12.46□□□□□ -0.42
PKM-220ENST00000568459 BSCL2Q96G97 398 aaPredicted RBP12.46□□□□□ -0.42
PKM-220ENST00000568459 CYYR1Q96J86 154 aa12.46□□□□□ -0.42
PKM-220ENST00000568459 HDHD3Q9BSH5 251 aaPredicted RBP12.46□□□□□ -0.42
PKM-220ENST00000568459 SF3B5Q9BWJ5 86 aaKnown RBP12.46□□□□□ -0.42
PKM-220ENST00000568459 TOLLIPQ9H0E2 274 aa12.46□□□□□ -0.42
PKM-220ENST00000568459 PLEKHF2Q9H8W4 249 aa12.46□□□□□ -0.42
PKM-220ENST00000568459 RCL1Q9Y2P8 373 aaKnown RBP12.46□□□□□ -0.42
PKM-220ENST00000568459 SHANK1Q9Y566 2161 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 hCG_1809904A0A1W2PP81 198 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 A0A1W2PR64 198 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 A0A1W2PRV1 198 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 OR5H15A6NDH6 313 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 ZNF729A6NN14 1252 aaPredicted RBP12.45□□□□□ -0.42
PKM-220ENST00000568459 B4DEV8 164 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 TRDCB7Z8K6 153 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 OR2J2O76002 312 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 NQO2P16083 231 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 CBR1P16152 277 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 OR8G1Q15617 311 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 OSR2Q8N2R0 312 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 GPR137CQ8N3F9 429 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 Q8NFD4 153 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 OR52M1Q8NGK5 317 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 CD300LFQ8TDQ1 290 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 TOMM40LQ969M1 308 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 THOC3Q96J01 351 aaKnown RBP12.45□□□□□ -0.42
PKM-220ENST00000568459 OPA3Q9H6K4 179 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 PLEK2Q9NYT0 353 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 FBXO7Q9Y3I1 522 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 DOPEY2Q9Y3R5 2298 aa12.45□□□□□ -0.42
PKM-220ENST00000568459 A0A1W2PPE2 198 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 FAM230AA0A1W2PPH8 454 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 PDCD6O75340 191 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 DIRAS3O95661 229 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 F10P00742 488 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 HBE1P02100 147 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 CST2P09228 141 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 NHLH2Q02577 135 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 TAF9Q16594 264 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 ZNF506Q5JVG8 444 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 SPSB3Q6PJ21 355 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 C20orf196Q8IYI0 205 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 BORCS8Q96FH0 119 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 RASL10BQ96S79 203 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 PAPOLGQ9BWT3 736 aaKnown RBP12.44□□□□□ -0.42
PKM-220ENST00000568459 TMEM222Q9H0R3 208 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 SH3BGRL3Q9H299 93 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 LYRM2Q9NU23 88 aaPredicted RBP12.44□□□□□ -0.42
PKM-220ENST00000568459 CHCHD2Q9Y6H1 151 aaPredicted RBP12.44□□□□□ -0.42
PKM-220ENST00000568459 LRRK2Q5S007 2527 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 TRAV20A0A0B4J274 112 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 C3orf85A0A1B0GTC6 90 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 NPIPA2E9PIF3 369 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 NPIPA3F8WFD2 350 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 MPPED1O15442 326 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 SYNGR3O43761 229 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 FHITP49789 147 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 FUT6P51993 359 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 HERV-K104P61576 105 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 SP6Q3SY56 376 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 TMEM182Q6ZP80 229 aaPredicted RBP12.44□□□□□ -0.42
PKM-220ENST00000568459 SLC35E3Q7Z769 313 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 Q8NA96 180 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 OR10AD1Q8NGE0 317 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 FAM213BQ8TBF2 198 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 IL22RA2Q969J5 263 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 GPR173Q9NS66 373 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 TMEM242Q9NWH2 141 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 TREM2Q9NZC2 230 aa12.44□□□□□ -0.42
PKM-220ENST00000568459 TRAV1-1A0A0B4J248 108 aa12.43□□□□□ -0.42
PKM-220ENST00000568459 PHF1O43189 567 aaPredicted RBP12.43□□□□□ -0.42
PKM-220ENST00000568459 XRCC2O43543 280 aa12.43□□□□□ -0.42
PKM-220ENST00000568459 ARG1P05089 322 aa12.43□□□□□ -0.42
PKM-220ENST00000568459 SRP19P09132 144 aaKnown RBP12.43□□□□□ -0.42
PKM-220ENST00000568459 ATP6V0CP27449 155 aa12.43□□□□□ -0.42
PKM-220ENST00000568459 PPP1CCP36873 323 aaKnown RBP12.43□□□□□ -0.42
PKM-220ENST00000568459 NKX2-1P43699 371 aaPredicted RBP12.43□□□□□ -0.42
PKM-220ENST00000568459 DSCR4P56555 118 aaPredicted RBP12.43□□□□□ -0.42
PKM-220ENST00000568459 Q0VFX4 171 aa12.43□□□□□ -0.42
PKM-220ENST00000568459 FOXO1Q12778 655 aa12.43□□□□□ -0.42
PKM-220ENST00000568459 MALLQ13021 153 aa12.43□□□□□ -0.42
PKM-220ENST00000568459 SNAI3Q3KNW1 292 aa12.43□□□□□ -0.42
PKM-220ENST00000568459 ACSF3Q4G176 576 aaPredicted RBP12.43□□□□□ -0.42
PKM-220ENST00000568459 PHYHD1Q5SRE7 291 aa12.43□□□□□ -0.42
PKM-220ENST00000568459 SLC22A25Q6T423 547 aa12.43□□□□□ -0.42
PKM-220ENST00000568459 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.43□□□□□ -0.42
PKM-220ENST00000568459 SLC35G3Q8N808 338 aa12.43□□□□□ -0.42
PKM-220ENST00000568459 HSD17B11Q8NBQ5 300 aa12.43□□□□□ -0.42
PKM-220ENST00000568459 OR2G3Q8NGZ4 309 aa12.43□□□□□ -0.42
PKM-220ENST00000568459 EDARADDQ8WWZ3 215 aa12.43□□□□□ -0.42
PKM-220ENST00000568459 REEP6Q96HR9 211 aa12.43□□□□□ -0.42
PKM-220ENST00000568459 DEFB126Q9BYW3 111 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms