RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 GBX2P52951 348 aaPredicted RBP3.72□□□□□ -1.81
SMG1-206ENST00000562668 TMEM33P57088 247 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 LOXL1Q08397 574 aaPredicted RBP3.72□□□□□ -1.81
SMG1-206ENST00000562668 MED21Q13503 144 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 DCTN2Q13561 401 aaKnown RBP3.72□□□□□ -1.81
SMG1-206ENST00000562668 TPBGQ13641 420 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 ZMYND11Q15326 602 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 SPHARQ15513 63 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 OR8G1Q15617 311 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 TBCEQ15813 527 aaPredicted RBP3.72□□□□□ -1.81
SMG1-206ENST00000562668 SSX1Q16384 188 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 CEACAM21Q3KPI0 293 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 KCTD21Q4G0X4 260 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 CXorf66Q5JRM2 361 aaPredicted RBP3.72□□□□□ -1.81
SMG1-206ENST00000562668 FAM201AQ5SY85 155 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 CLVS2Q5SYC1 327 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 UBE2UQ5VVX9 321 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 WDR82Q6UXN9 313 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 UNQ9370/PRO34162Q6UXP9 181 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 TMPRSS11AQ6ZMR5 421 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 TMEM91Q6ZNR0 172 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 ZNF826PQ6ZT77 177 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 Q75L30 129 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 UTS2BQ765I0 119 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 CALHM1Q8IU99 346 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 SPERTQ8NA61 448 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 OR1M1Q8NGA1 313 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 OR5A2Q8NGI9 324 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 OR5AK2Q8NH90 309 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 HAVCR2Q8TDQ0 301 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 PIGCQ92535 297 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 GHSRQ92847 366 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 MYDGFQ969H8 173 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 FGGYQ96C11 551 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 C10orf35Q96D05 121 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 TMEM68Q96MH6 324 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 DCTN5Q9BTE1 182 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 MND1Q9BWT6 205 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 YTHDF1Q9BYJ9 559 aaKnown RBP3.72□□□□□ -1.81
SMG1-206ENST00000562668 REG4Q9BYZ8 158 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 BPESC1Q9GZL8 116 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 CHST5Q9GZS9 411 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 PPIL3Q9H2H8 161 aaKnown RBP3.72□□□□□ -1.81
SMG1-206ENST00000562668 METTL17Q9H7H0 456 aaPredicted RBP3.72□□□□□ -1.81
SMG1-206ENST00000562668 TMEM165Q9HC07 324 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 ISYNA1Q9NPH2 558 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 ACOT13Q9NPJ3 140 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 GPR173Q9NS66 373 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 TMEM106BQ9NUM4 274 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 SCN3BQ9NY72 215 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 TREM2Q9NZC2 230 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 ENPP5Q9UJA9 477 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 HHLA2Q9UM44 414 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 WIPI2Q9Y4P8 454 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 MAP1AP78559 2803 aaPredicted RBP3.72□□□□□ -1.81
SMG1-206ENST00000562668 IGKV1-12A0A0C4DH73 117 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 A0A1B0GVI7 797 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 LRP5LA4QPB2 252 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 ANKRD61A6NGH8 418 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 OR5B21A6NL26 309 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 TMEM210A6NLX4 147 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 SRRM5B3KS81 715 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 ZNF732B4DXR9 585 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 F8VVB4 439 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 F8VWA3 439 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 CDIPTO14735 213 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 MYL12BO14950 172 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 SYNGR1O43759 233 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 NOS1APO75052 506 aaPredicted RBP3.71□□□□□ -1.82
SMG1-206ENST00000562668 MTRF1O75570 445 aaKnown RBP3.71□□□□□ -1.82
SMG1-206ENST00000562668 RHBDL1O75783 438 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 NRASP01111 189 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 IGKV1D-12P01611 117 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 SMIM18P0DKX4 95 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 ADRA2CP18825 462 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 ATF1P18846 271 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 SRP9P49458 86 aaKnown RBP3.71□□□□□ -1.82
SMG1-206ENST00000562668 TAS2R43P59537 309 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 PAX2Q02962 417 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 MLLT11Q13015 90 aaPredicted RBP3.71□□□□□ -1.82
SMG1-206ENST00000562668 GPR50Q13585 617 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 INSL4Q14641 139 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 TMEM155Q4W5P6 130 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 YIF1BQ5BJH7 314 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 AVPI1Q5T686 147 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 TEX36Q5VZQ5 186 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 ZNF773Q6PK81 442 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 CD200R1LQ6Q8B3 271 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 CLEC2AQ6UVW9 174 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 ASCL4Q6XD76 172 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 ZNF841Q6ZN19 808 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 LRRC28Q86X40 367 aaPredicted RBP3.71□□□□□ -1.82
SMG1-206ENST00000562668 PHC2Q8IXK0 858 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 ZNF676Q8N7Q3 588 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 C19orf18Q8NEA5 215 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 OR51A2Q8NGJ7 313 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 OR10Z1Q8NGY1 313 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 CLDND2Q8NHS1 167 aa3.71□□□□□ -1.82
SMG1-206ENST00000562668 PP6455Q8WZ26 134 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms