RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 C17orf105B2RV13 164 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 PDGFBP01127 241 aaPredicted RBP13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 HNF1AP20823 631 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 SUMO3P55854 103 aaPredicted RBP13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 MRPS34P82930 218 aaKnown RBP13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 TSPO2Q5TGU0 170 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 ASCL4Q6XD76 172 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 MEX3BQ6ZN04 569 aaKnown RBP13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 GCNT2Q8N0V5 402 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 OR5D13Q8NGL4 314 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 ADIPOR1Q96A54 375 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 CIB3Q96Q77 187 aaPredicted RBP13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 RASL10BQ96S79 203 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 RNF2Q99496 336 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 ALPK2Q86TB3 2170 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 TRBV23OR9-2A0A075B6M9 112 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 LRRC3CA6NJW4 275 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 FAM166BA8MTA8 275 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 CHST1O43916 411 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 PPYP01298 95 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 WNT2P09544 360 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 HLA-DOBP13765 273 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 UBE2G2P60604 165 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 ZNF154Q13106 437 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 LRRC75BQ2VPJ9 315 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 LCN15Q6UWW0 184 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 LINC01551Q86U37 167 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 OR56B2PQ8NGI1 322 aa13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 RNASE8Q8TDE3 154 aaKnown RBP13.99□□□□□ -0.17
HMBOX1-212ENST00000558662 PRRC2BQ5JSZ5 2229 aaKnown RBP13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 PCNX3Q9H6A9 2034 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 IGKV1D-43A0A0B4J1Z2 117 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 A0A1W2PQU0 124 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 ADAM20O43506 726 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 GYPAP02724 150 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 POU2F2P09086 479 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 CTSEP14091 401 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 BMP5P22003 454 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 POU3F1Q03052 451 aaPredicted RBP13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 TLE3Q04726 772 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 ZNF726P1Q15940 193 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 OR8G2PQ6IF36 304 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 FAM57BQ71RH2 274 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 CPEB2Q7Z5Q1 589 aaKnown RBP13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 SHISA5Q8N114 240 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 KLHDC1Q8N7A1 406 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 TMEM217Q8N7C4 229 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 NECAP1Q8NC96 275 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 ZNF738Q8NE65 137 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 PARLQ9H300 379 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 SLC39A9Q9NUM3 307 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 ALKBH4Q9NXW9 302 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 IL36GQ9NZH8 169 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 HSPB7Q9UBY9 170 aa13.98□□□□□ -0.17
HMBOX1-212ENST00000558662 HS3ST1O14792 307 aa13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 ATXN7O15265 892 aaPredicted RBP13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 TMPRSS2O15393 492 aa13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 LILRA1O75019 489 aa13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 TIAF1O95411 115 aa13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 IGHG1P01857 330 aa13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 PVRP15151 417 aa13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 IL3RAP26951 378 aa13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 S100GP29377 79 aa13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 PAX9P55771 341 aa13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 MESP2Q0VG99 397 aa13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 CXorf66Q5JRM2 361 aaPredicted RBP13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 UEVLDQ8IX04 471 aa13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 OR5AU1Q8NGC0 362 aa13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 PLPPR1Q8TBJ4 325 aa13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 MRPL30Q8TCC3 161 aaKnown RBP13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 ZNF296Q8WUU4 475 aaPredicted RBP13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 OR1E3Q8WZA6 343 aa13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 LHX4Q969G2 390 aa13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 PGAM5Q96HS1 289 aa13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 ZNF552Q9H707 407 aaPredicted RBP13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 PNRC2Q9NPJ4 139 aaKnown RBP13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 CDC42EP3Q9UKI2 254 aa13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 ARID1AO14497 2285 aa13.97□□□□□ -0.17
HMBOX1-212ENST00000558662 MLNRO43193 412 aa13.96□□□□□ -0.17
HMBOX1-212ENST00000558662 CNOT4O95628 575 aaKnown RBP13.96□□□□□ -0.17
HMBOX1-212ENST00000558662 TMEM50AO95807 157 aa13.96□□□□□ -0.17
HMBOX1-212ENST00000558662 ZNF776Q68DI1 518 aaPredicted RBP13.96□□□□□ -0.17
HMBOX1-212ENST00000558662 LHX8Q68G74 356 aa13.96□□□□□ -0.17
HMBOX1-212ENST00000558662 C20orf196Q8IYI0 205 aa13.96□□□□□ -0.17
HMBOX1-212ENST00000558662 SVIPQ8NHG7 77 aa13.96□□□□□ -0.17
HMBOX1-212ENST00000558662 NEIL1Q96FI4 390 aaPredicted RBP13.96□□□□□ -0.17
HMBOX1-212ENST00000558662 HDHD3Q9BSH5 251 aaPredicted RBP13.96□□□□□ -0.17
HMBOX1-212ENST00000558662 HRASLS2Q9NWW9 162 aa13.96□□□□□ -0.17
HMBOX1-212ENST00000558662 A0A1W2PP55 124 aa13.96□□□□□ -0.18
HMBOX1-212ENST00000558662 LRP5LA4QPB2 252 aa13.96□□□□□ -0.18
HMBOX1-212ENST00000558662 H0Y980 276 aa13.96□□□□□ -0.18
HMBOX1-212ENST00000558662 H0YIG0 161 aa13.96□□□□□ -0.18
HMBOX1-212ENST00000558662 NXPH2O95156 264 aa13.96□□□□□ -0.18
HMBOX1-212ENST00000558662 IGKV3-11P04433 115 aa13.96□□□□□ -0.18
HMBOX1-212ENST00000558662 BIDP55957 195 aa13.96□□□□□ -0.18
HMBOX1-212ENST00000558662 CLRN1P58418 232 aa13.96□□□□□ -0.18
HMBOX1-212ENST00000558662 Q0VG73 95 aa13.96□□□□□ -0.18
HMBOX1-212ENST00000558662 HLA-DQA1Q5Y7H0 255 aa13.96□□□□□ -0.18
HMBOX1-212ENST00000558662 SLC25A47Q6Q0C1 308 aa13.96□□□□□ -0.18
HMBOX1-212ENST00000558662 TBC1D26Q86UD7 250 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms