RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 CARD18P57730 90 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 SRPXP78539 464 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 TMEM267Q0VDI3 215 aaPredicted RBP9.78□□□□□ -0.84
SRP54-213ENST00000556994 MPV17LQ2QL34 196 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 NMSQ5H8A3 153 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 ZNF506Q5JVG8 444 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 C9orf135Q5VTT2 229 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 SP5Q6BEB4 398 aaPredicted RBP9.78□□□□□ -0.84
SRP54-213ENST00000556994 DNASE2BQ8WZ79 361 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 SPIN2AQ99865 258 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 SPIN2BQ9BPZ2 258 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 PLSCR2Q9NRY7 297 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 IL36GQ9NZH8 169 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 U3KQA8 63 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 FREM1Q5H8C1 2179 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 ZFP92A6NM28 416 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 ZNF729A6NN14 1252 aaPredicted RBP9.77□□□□□ -0.85
SRP54-213ENST00000556994 HSPB1P04792 205 aaKnown RBP9.77□□□□□ -0.85
SRP54-213ENST00000556994 MDKP21741 143 aaPredicted RBP9.77□□□□□ -0.85
SRP54-213ENST00000556994 PLA2G5P39877 138 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 HAAOP46952 286 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 GLIPR1P48060 266 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 GPM6AP51674 278 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 RAC3P60763 192 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 RAB11AP62491 216 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 ID3Q02535 119 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 OR8B8Q15620 311 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 SLC25A24Q6NUK1 477 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 FAM180AQ6UWF9 173 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 ZNF600Q6ZNG1 722 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 WDR5BQ86VZ2 330 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 CPEB3Q8NE35 698 aaKnown RBP9.77□□□□□ -0.85
SRP54-213ENST00000556994 SNIP1Q8TAD8 396 aaKnown RBP9.77□□□□□ -0.85
SRP54-213ENST00000556994 GNPNAT1Q96EK6 184 aaPredicted RBP9.77□□□□□ -0.85
SRP54-213ENST00000556994 RHOVQ96L33 236 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 RSG1Q9BU20 258 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 PCED1AQ9H1Q7 454 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 VSIRQ9H7M9 311 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 Q9N2K0 584 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 NCKAP5O14513 1909 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 A0A087WWC5 75 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 IGKV1-6A0A0C4DH72 117 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 BTBD17A6NE02 478 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 ZNF716A6NP11 495 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 CBR3O75828 277 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 KLK3P07288 261 aaPredicted RBP9.77□□□□□ -0.85
SRP54-213ENST00000556994 RFPL3SP0C7P2 107 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 COX6A1P12074 109 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 FGF8P55075 233 aaPredicted RBP9.77□□□□□ -0.85
SRP54-213ENST00000556994 FAM185AQ8N0U4 392 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 IMMP1LQ96LU5 166 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 FGF23Q9GZV9 251 aaPredicted RBP9.77□□□□□ -0.85
SRP54-213ENST00000556994 TAAR3PQ9P1P4 343 aa9.77□□□□□ -0.85
SRP54-213ENST00000556994 WDFY4Q6ZS81 3184 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 TRGC1P0CF51 173 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 VDAC1P21796 283 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 GPX4P36969 197 aaPredicted RBP9.76□□□□□ -0.85
SRP54-213ENST00000556994 CD200P41217 278 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 HLA-DRB3P79483 266 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 TLE4Q04727 773 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 OR2T2Q6IF00 324 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 LCN15Q6UWW0 184 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 RPS19BP1Q86WX3 136 aaKnown RBP9.76□□□□□ -0.85
SRP54-213ENST00000556994 OR8G5Q8NG78 346 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 OR56B2PQ8NGI1 322 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 OR51H1Q8NH63 302 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 CPT1CQ8TCG5 803 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 ABHD5Q8WTS1 349 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 FRZBQ92765 325 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 ATP5SQ99766 215 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 FAM86C1Q9NVL1 165 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 TREM2Q9NZC2 230 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 RNF115Q9Y4L5 304 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 TRAPPC6AO75865 159 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 F10P00742 488 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 UCP1P25874 307 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 B3GALT5-AS1P59052 145 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 TAS2R30P59541 319 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 NKX6-1P78426 367 aaPredicted RBP9.76□□□□□ -0.85
SRP54-213ENST00000556994 KRTAP27-1Q3LI81 207 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 C20orf204Q6ZNR8 217 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 GGNQ86UU5 652 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 ABHD3Q8WU67 409 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 SF3B5Q9BWJ5 86 aaKnown RBP9.76□□□□□ -0.85
SRP54-213ENST00000556994 ZNF576Q9H609 170 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 ZNF665Q9H7R5 613 aa9.76□□□□□ -0.85
SRP54-213ENST00000556994 TNRC18O15417 2968 aaPredicted RBP9.75□□□□□ -0.85
SRP54-213ENST00000556994 CHD3Q12873 2000 aaKnown RBP9.75□□□□□ -0.85
SRP54-213ENST00000556994 A0A096LPE4 126 aa9.75□□□□□ -0.85
SRP54-213ENST00000556994 A0A1W2PPZ6 126 aa9.75□□□□□ -0.85
SRP54-213ENST00000556994 PPP1R2P9O14990 202 aa9.75□□□□□ -0.85
SRP54-213ENST00000556994 GATCO43716 136 aaKnown RBP9.75□□□□□ -0.85
SRP54-213ENST00000556994 PGLYRP1O75594 196 aaPredicted RBP9.75□□□□□ -0.85
SRP54-213ENST00000556994 FABP4P15090 132 aa9.75□□□□□ -0.85
SRP54-213ENST00000556994 TLE1Q04724 770 aa9.75□□□□□ -0.85
SRP54-213ENST00000556994 HNF4GQ14541 408 aa9.75□□□□□ -0.85
SRP54-213ENST00000556994 KHDC3LQ587J8 217 aa9.75□□□□□ -0.85
SRP54-213ENST00000556994 WIPI1Q5MNZ9 446 aaPredicted RBP9.75□□□□□ -0.85
SRP54-213ENST00000556994 SSX7Q7RTT5 188 aa9.75□□□□□ -0.85
SRP54-213ENST00000556994 ZNF295-AS1Q8N0V1 137 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms