RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 ZNF780AO75290 641 aaPredicted RBP13.6□□□□□ -0.23
CHGA-206ENST00000556876 ZFPL1O95159 310 aa13.6□□□□□ -0.23
CHGA-206ENST00000556876 IGHG2P01859 326 aa13.6□□□□□ -0.23
CHGA-206ENST00000556876 GAPDHP04406 335 aaKnown RBP13.6□□□□□ -0.23
CHGA-206ENST00000556876 THBS3P49746 956 aa13.6□□□□□ -0.23
CHGA-206ENST00000556876 CD69Q07108 199 aa13.6□□□□□ -0.23
CHGA-206ENST00000556876 KLHL22Q53GT1 634 aa13.6□□□□□ -0.23
CHGA-206ENST00000556876 MRPL41Q8IXM3 137 aaKnown RBP13.6□□□□□ -0.23
CHGA-206ENST00000556876 DRAM1Q8N682 238 aa13.6□□□□□ -0.23
CHGA-206ENST00000556876 C5orf56Q8N8D9 126 aa13.6□□□□□ -0.23
CHGA-206ENST00000556876 C8orf31Q8N9H6 132 aa13.6□□□□□ -0.23
CHGA-206ENST00000556876 OR52M1Q8NGK5 317 aa13.6□□□□□ -0.23
CHGA-206ENST00000556876 OR10AC1Q8NH08 325 aa13.6□□□□□ -0.23
CHGA-206ENST00000556876 OR56B4Q8NH76 319 aa13.6□□□□□ -0.23
CHGA-206ENST00000556876 TSEN15Q8WW01 171 aaKnown RBP13.6□□□□□ -0.23
CHGA-206ENST00000556876 NR1H4Q96RI1 486 aaPredicted RBP13.6□□□□□ -0.23
CHGA-206ENST00000556876 S100A13Q99584 98 aa13.6□□□□□ -0.23
CHGA-206ENST00000556876 ZNF649Q9BS31 505 aa13.6□□□□□ -0.23
CHGA-206ENST00000556876 PPIL3Q9H2H8 161 aaKnown RBP13.6□□□□□ -0.23
CHGA-206ENST00000556876 IFT22Q9H7X7 185 aa13.6□□□□□ -0.23
CHGA-206ENST00000556876 ING3Q9NXR8 418 aa13.6□□□□□ -0.23
CHGA-206ENST00000556876 RPL36Q9Y3U8 105 aaKnown RBP13.6□□□□□ -0.23
CHGA-206ENST00000556876 GMPPBQ9Y5P6 360 aa13.6□□□□□ -0.23
CHGA-206ENST00000556876 NUDT19A8MXV4 375 aa13.59□□□□□ -0.23
CHGA-206ENST00000556876 RAMP3O60896 148 aa13.59□□□□□ -0.23
CHGA-206ENST00000556876 IL3RAP26951 378 aa13.59□□□□□ -0.23
CHGA-206ENST00000556876 ZNF816Q0VGE8 651 aaPredicted RBP13.59□□□□□ -0.23
CHGA-206ENST00000556876 EBI3Q14213 229 aa13.59□□□□□ -0.23
CHGA-206ENST00000556876 Q3ZCU0 254 aa13.59□□□□□ -0.23
CHGA-206ENST00000556876 CCDC58Q4VC31 144 aa13.59□□□□□ -0.23
CHGA-206ENST00000556876 NHLRC3Q5JS37 347 aa13.59□□□□□ -0.23
CHGA-206ENST00000556876 TEX38Q6PEX7 206 aa13.59□□□□□ -0.23
CHGA-206ENST00000556876 ASCL4Q6XD76 172 aa13.59□□□□□ -0.23
CHGA-206ENST00000556876 OR2W3Q7Z3T1 314 aa13.59□□□□□ -0.23
CHGA-206ENST00000556876 SLC35E3Q7Z769 313 aa13.59□□□□□ -0.23
CHGA-206ENST00000556876 LHFPL3Q86UP9 236 aa13.59□□□□□ -0.23
CHGA-206ENST00000556876 TNFAIP8L1Q8WVP5 186 aa13.59□□□□□ -0.23
CHGA-206ENST00000556876 CHCHD3Q9NX63 227 aaKnown RBP13.59□□□□□ -0.23
CHGA-206ENST00000556876 TRAV24A0A0B4J272 114 aa13.58□□□□□ -0.24
CHGA-206ENST00000556876 A0A1W2PPI3 338 aa13.58□□□□□ -0.24
CHGA-206ENST00000556876 AP4M1O00189 453 aa13.58□□□□□ -0.24
CHGA-206ENST00000556876 CSTBP04080 98 aaKnown RBP13.58□□□□□ -0.24
CHGA-206ENST00000556876 NHLRC4P0CG21 123 aaPredicted RBP13.58□□□□□ -0.24
CHGA-206ENST00000556876 TMEM30BQ3MIR4 351 aa13.58□□□□□ -0.24
CHGA-206ENST00000556876 RSBN1Q5VWQ0 802 aaPredicted RBP13.58□□□□□ -0.24
CHGA-206ENST00000556876 ZNF529Q6P280 563 aa13.58□□□□□ -0.24
CHGA-206ENST00000556876 ZNF329Q86UD4 541 aa13.58□□□□□ -0.24
CHGA-206ENST00000556876 SATL1Q86VE3 508 aa13.58□□□□□ -0.24
CHGA-206ENST00000556876 TGIF2LXQ8IUE1 241 aa13.58□□□□□ -0.24
CHGA-206ENST00000556876 OR8H1Q8NGG4 311 aa13.58□□□□□ -0.24
CHGA-206ENST00000556876 OR13A1Q8NGR1 328 aa13.58□□□□□ -0.24
CHGA-206ENST00000556876 GPR148Q8TDV2 347 aa13.58□□□□□ -0.24
CHGA-206ENST00000556876 B9D2Q9BPU9 175 aa13.58□□□□□ -0.24
CHGA-206ENST00000556876 METTL9Q9H1A3 318 aa13.58□□□□□ -0.24
CHGA-206ENST00000556876 MRPS18AQ9NVS2 196 aaKnown RBP13.58□□□□□ -0.24
CHGA-206ENST00000556876 ERVK13-1Q9NX77 482 aa13.58□□□□□ -0.24
CHGA-206ENST00000556876 IL36GQ9NZH8 169 aa13.58□□□□□ -0.24
CHGA-206ENST00000556876 SIRT4Q9Y6E7 314 aaPredicted RBP13.58□□□□□ -0.24
CHGA-206ENST00000556876 TMEM30CPA0ZSE6 113 aa13.57□□□□□ -0.24
CHGA-206ENST00000556876 HSPB6O14558 160 aa13.57□□□□□ -0.24
CHGA-206ENST00000556876 EI24O14681 340 aa13.57□□□□□ -0.24
CHGA-206ENST00000556876 RRP9O43818 475 aaKnown RBP13.57□□□□□ -0.24
CHGA-206ENST00000556876 KRTAP10-11P60412 298 aa13.57□□□□□ -0.24
CHGA-206ENST00000556876 PPP3R1P63098 170 aa13.57□□□□□ -0.24
CHGA-206ENST00000556876 GPR176Q14439 515 aa13.57□□□□□ -0.24
CHGA-206ENST00000556876 ZNF695Q8IW36 515 aa13.57□□□□□ -0.24
CHGA-206ENST00000556876 LINC00311Q8N616 119 aa13.57□□□□□ -0.24
CHGA-206ENST00000556876 OR2T10Q8NGZ9 312 aa13.57□□□□□ -0.24
CHGA-206ENST00000556876 RHOXF1Q8NHV9 184 aa13.57□□□□□ -0.24
CHGA-206ENST00000556876 MRGPRDQ8TDS7 321 aa13.57□□□□□ -0.24
CHGA-206ENST00000556876 DPCDQ9BVM2 203 aaPredicted RBP13.57□□□□□ -0.24
CHGA-206ENST00000556876 SPACA1Q9HBV2 294 aa13.57□□□□□ -0.24
CHGA-206ENST00000556876 TMEM138Q9NPI0 162 aa13.57□□□□□ -0.24
CHGA-206ENST00000556876 LIN7CQ9NUP9 197 aaKnown RBP13.57□□□□□ -0.24
CHGA-206ENST00000556876 ST3GAL6Q9Y274 331 aa13.57□□□□□ -0.24
CHGA-206ENST00000556876 WI2-2373I1.2A0A1W2PRP0 233 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 SH2D7A6NKC9 451 aaPredicted RBP13.56□□□□□ -0.24
CHGA-206ENST00000556876 HSD17B6O14756 317 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 TXNL1O43396 289 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 ORC5O43913 435 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 IGKV1D-33P01593 117 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 IGKV1-33P01594 117 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 DGCR2P98153 550 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 PNLIPRP3Q17RR3 467 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 MPV17LQ2QL34 196 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 RPL22L1Q6P5R6 122 aaKnown RBP13.56□□□□□ -0.24
CHGA-206ENST00000556876 C10orf99Q6UWK7 81 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 TMPRSS11AQ6ZMR5 421 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 MOB3BQ86TA1 216 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 IZUMO1Q8IYV9 350 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 STPG2Q8N412 459 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 STX19Q8N4C7 294 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 PYDC1Q8WXC3 89 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 WWC2-AS2Q96NR7 200 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 PDCD1LG2Q9BQ51 273 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 CHCHD6Q9BRQ6 235 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 C9orf16Q9BUW7 83 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 FAM192AQ9GZU8 254 aa13.56□□□□□ -0.24
CHGA-206ENST00000556876 ISG20L2Q9H9L3 353 aaKnown RBP13.56□□□□□ -0.24
CHGA-206ENST00000556876 FAM53CQ9NYF3 392 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms