RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 Q6ZS49 121 aa7.68□□□□□ -1.18
ACTN1-218ENST00000556343 BEST4Q8NFU0 473 aa7.68□□□□□ -1.18
ACTN1-218ENST00000556343 OR5H2Q8NGV7 314 aa7.68□□□□□ -1.18
ACTN1-218ENST00000556343 OR4K15Q8NH41 348 aa7.68□□□□□ -1.18
ACTN1-218ENST00000556343 MRPL30Q8TCC3 161 aaKnown RBP7.68□□□□□ -1.18
ACTN1-218ENST00000556343 H1FXQ92522 213 aaKnown RBP7.68□□□□□ -1.18
ACTN1-218ENST00000556343 LURAP1Q96LR2 239 aa7.68□□□□□ -1.18
ACTN1-218ENST00000556343 SDHCQ99643 169 aaPredicted RBP7.68□□□□□ -1.18
ACTN1-218ENST00000556343 SHARPINQ9H0F6 387 aa7.68□□□□□ -1.18
ACTN1-218ENST00000556343 PATZ1Q9HBE1 687 aaKnown RBP7.68□□□□□ -1.18
ACTN1-218ENST00000556343 Q9N2K0 584 aa7.68□□□□□ -1.18
ACTN1-218ENST00000556343 ING3Q9NXR8 418 aa7.68□□□□□ -1.18
ACTN1-218ENST00000556343 KLK11Q9UBX7 282 aa7.68□□□□□ -1.18
ACTN1-218ENST00000556343 CLN8Q9UBY8 286 aa7.68□□□□□ -1.18
ACTN1-218ENST00000556343 OPN4Q9UHM6 478 aa7.68□□□□□ -1.18
ACTN1-218ENST00000556343 METRNQ9UJH8 293 aa7.68□□□□□ -1.18
ACTN1-218ENST00000556343 USF3Q68DE3 2245 aa7.68□□□□□ -1.18
ACTN1-218ENST00000556343 FASNP49327 2511 aaKnown RBP7.68□□□□□ -1.18
ACTN1-218ENST00000556343 hCG_1809904A0A1W2PP81 198 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 A0A1W2PPE2 198 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 A0A1W2PQ09 198 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 A0A1W2PR64 198 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 A0A1W2PRV1 198 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 ANKRD20A5PA0PJZ0 165 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 SSX5O60225 188 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 RAB3DO95716 219 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 WNT2P09544 360 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 GLP1RP43220 463 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 TSPAN5P62079 268 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 GNB2P62879 340 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 RPL31P62899 125 aaKnown RBP7.67□□□□□ -1.18
ACTN1-218ENST00000556343 HOXA4Q00056 320 aaPredicted RBP7.67□□□□□ -1.18
ACTN1-218ENST00000556343 TMEM30BQ3MIR4 351 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 RNASE10Q5GAN6 216 aaKnown RBP7.67□□□□□ -1.18
ACTN1-218ENST00000556343 OLFML2AQ68BL7 652 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 STEAP1BQ6NZ63 245 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 LYPD2Q6UXB3 125 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 GAPTQ8N292 157 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 FAM216BQ8N7L0 139 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 POC5Q8NA72 575 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 OR5AP2Q8NGF4 316 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 OR4A4PQ8NGN8 299 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 PLPPR1Q8TBJ4 325 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 C10orf105Q8TEF2 133 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 CCDC107Q8WV48 283 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 NRGNQ92686 78 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 GCDHQ92947 438 aaPredicted RBP7.67□□□□□ -1.18
ACTN1-218ENST00000556343 NECAP2Q9NVZ3 263 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 ANXA10Q9UJ72 324 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 SCP2D1Q9UJQ7 156 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 ELF5Q9UKW6 265 aaPredicted RBP7.67□□□□□ -1.18
ACTN1-218ENST00000556343 ANAPC10Q9UM13 185 aa7.67□□□□□ -1.18
ACTN1-218ENST00000556343 UBE2J1Q9Y385 318 aaPredicted RBP7.67□□□□□ -1.18
ACTN1-218ENST00000556343 LINC00854A0A1B0GVQ3 168 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 FABP7O15540 132 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 FOXH1O75593 365 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 HLA-DMAP28067 261 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 IL2RGP31785 369 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 GLIPR1P48060 266 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 KRTAP10-9P60411 292 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 SEC61A1P61619 476 aaKnown RBP7.66□□□□□ -1.18
ACTN1-218ENST00000556343 HLA-DRB3P79483 266 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 ASAH1Q13510 395 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 CDK10Q15131 360 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 RGS21Q2M5E4 152 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 STEAP3Q658P3 488 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 HIST2H2BCQ6DN03 193 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 ZNF880Q6PDB4 577 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 ZNF782Q6ZMW2 699 aaPredicted RBP7.66□□□□□ -1.18
ACTN1-218ENST00000556343 LYSMD2Q8IV50 215 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 GVQW1Q8N7I0 195 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 DYRK2Q92630 601 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 CORO2AQ92828 525 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 TRIM63Q969Q1 353 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 ARL11Q969Q4 196 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 GALMQ96C23 342 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 COQ2Q96H96 371 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 DMRTB1Q96MA1 342 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 SCGB3A2Q96PL1 93 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 PRRT1Q99946 306 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 HDHD3Q9BSH5 251 aaPredicted RBP7.66□□□□□ -1.18
ACTN1-218ENST00000556343 SSBP3Q9BWW4 388 aaPredicted RBP7.66□□□□□ -1.18
ACTN1-218ENST00000556343 BPESC1Q9GZL8 116 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 GAL3ST2Q9H3Q3 398 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 TAF9BQ9HBM6 251 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 MCUBQ9NWR8 336 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 TAS2R3Q9NYW6 316 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 ZNF581Q9P0T4 197 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 ZNF230Q9UIE0 474 aaPredicted RBP7.66□□□□□ -1.18
ACTN1-218ENST00000556343 KIF25Q9UIL4 384 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 LINC00312Q9Y6C7 94 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 LRBAP50851 2863 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 RAI1Q7Z5J4 1906 aaPredicted RBP7.66□□□□□ -1.18
ACTN1-218ENST00000556343 CHD3Q12873 2000 aaKnown RBP7.66□□□□□ -1.18
ACTN1-218ENST00000556343 AKAP6Q13023 2319 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 SPG11Q96JI7 2443 aa7.66□□□□□ -1.18
ACTN1-218ENST00000556343 LOC105371242A0A075B767 164 aa7.65□□□□□ -1.18
ACTN1-218ENST00000556343 FAM240BA0A1B0GVZ2 78 aa7.65□□□□□ -1.18
ACTN1-218ENST00000556343 ZNF729A6NN14 1252 aaPredicted RBP7.65□□□□□ -1.18
ACTN1-218ENST00000556343 F5H0A9 414 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms