RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 VAMP5O95183 116 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 CDS2O95674 445 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 HBE1P02100 147 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 MBPP02686 304 aaPredicted RBP5.09□□□□□ -1.59
VPS33B-203ENST00000554264 FBP1P09467 338 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 RPS2P15880 293 aaKnown RBP5.09□□□□□ -1.59
VPS33B-203ENST00000554264 DUSP1P28562 367 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 S100A2P29034 98 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 FCGR2CP31995 323 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 CD80P33681 288 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 LPAR6P43657 344 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 OR1D4P47884 311 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 CAMLGP49069 296 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 P2RY4P51582 365 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 ZNF41P51814 821 aaPredicted RBP5.09□□□□□ -1.59
VPS33B-203ENST00000554264 ZNF134P52741 427 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 SNU13P55769 128 aaKnown RBP5.09□□□□□ -1.59
VPS33B-203ENST00000554264 S100A10P60903 97 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 SSTP61278 116 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 SUPT4H1P63272 117 aaKnown RBP5.09□□□□□ -1.59
VPS33B-203ENST00000554264 SLC35A1P78382 337 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 POU3F1Q03052 451 aaPredicted RBP5.09□□□□□ -1.59
VPS33B-203ENST00000554264 BAXQ07812 192 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 RAB32Q13637 225 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 CLINT1Q14677 625 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 GNMTQ14749 295 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 CNN3Q15417 329 aaKnown RBP5.09□□□□□ -1.59
VPS33B-203ENST00000554264 OR8G1Q15617 311 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 OR7A5Q15622 319 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 SRSF7Q16629 238 aaKnown RBP eCLIP5.09□□□□□ -1.59
VPS33B-203ENST00000554264 GUK1Q16774 197 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 IAH1Q2TAA2 248 aaPredicted RBP5.09□□□□□ -1.59
VPS33B-203ENST00000554264 DEFB110Q30KQ9 67 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 MS4A18Q3C1V0 323 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 LBHQ53QV2 105 aaPredicted RBP5.09□□□□□ -1.59
VPS33B-203ENST00000554264 FAM69BQ5VUD6 431 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 AADACL3Q5VUY0 350 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 OR52W1Q6IF63 320 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 DHRS11Q6UWP2 260 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 IGFL2Q6UWQ7 119 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 PLXDC2Q6UX71 529 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 COX15Q7KZN9 410 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 ABHD12BQ7Z5M8 362 aaPredicted RBP5.09□□□□□ -1.59
VPS33B-203ENST00000554264 MARCH3Q86UD3 253 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 C9orf40Q8IXQ3 194 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 LGI3Q8N145 548 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 GVQW1Q8N7I0 195 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 LINC00469Q8N7U9 141 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 OR10G4Q8NGN3 311 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 OR13C9Q8NGT0 318 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 OR1L3Q8NH93 324 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 DOK4Q8TEW6 326 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 ITLN2Q8WWU7 325 aaPredicted RBP5.09□□□□□ -1.59
VPS33B-203ENST00000554264 C11orf40Q8WZ69 217 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 RBMXL1Q96E39 390 aaKnown RBP5.09□□□□□ -1.59
VPS33B-203ENST00000554264 GNPNAT1Q96EK6 184 aaPredicted RBP5.09□□□□□ -1.59
VPS33B-203ENST00000554264 RRNAD1Q96FB5 475 aaKnown RBP5.09□□□□□ -1.59
VPS33B-203ENST00000554264 RTBDNQ9BSG5 229 aaPredicted RBP5.09□□□□□ -1.59
VPS33B-203ENST00000554264 CRB3Q9BUF7 120 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 ANGPTL4Q9BY76 406 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 MRPL13Q9BYD1 178 aaKnown RBP5.09□□□□□ -1.59
VPS33B-203ENST00000554264 SLC25A31Q9H0C2 315 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 KCNK15Q9H427 330 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 RPS10P5Q9NQ39 176 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 OR2S2Q9NQN1 319 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 CENPMQ9NSP4 180 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 NECAP2Q9NVZ3 263 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 EHFQ9NZC4 300 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 RNF150Q9ULK6 438 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 HDGFL3Q9Y3E1 203 aa5.09□□□□□ -1.59
VPS33B-203ENST00000554264 CSMD1Q96PZ7 3565 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 LOC100509620A0A075B734 347 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 A0A1B0GX78 115 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 FAM230AA0A1W2PPH8 454 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 C7orf77A4D0Y5 90 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 FAM90A10PA6NDY2 464 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 FAM90A18PA6NE21 464 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 FAM90A16PA6NEW6 464 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 FAM90A20PA6NIJ5 464 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 FAM90A8PA6NJQ4 464 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 FAM90A7PA6NKC0 464 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 FOXI3A8MTJ6 420 aaPredicted RBP5.08□□□□□ -1.6
VPS33B-203ENST00000554264 FAM90A22PA8MWA6 464 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 FAM90A12PA8MX19 464 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 FAM90A5PA8MXJ8 464 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 FAM90A23PA8MXZ1 464 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 H7C1Q1 480 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 MGST3O14880 152 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 ST8SIA3O43173 380 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 DNPH1O43598 174 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 CRTAPO75718 401 aaPredicted RBP5.08□□□□□ -1.6
VPS33B-203ENST00000554264 DHRS3O75911 302 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 IFNA10P01566 189 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 IGLV3-1P01715 115 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 IGHV2-5P01817 119 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 ACAA1P09110 424 aaPredicted RBP5.08□□□□□ -1.6
VPS33B-203ENST00000554264 FAM90A15PP0C7V4 464 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 FAM90A13PP0C7W8 464 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 FAM90A14PP0C7W9 464 aa5.08□□□□□ -1.6
VPS33B-203ENST00000554264 FAM90A24PP0C7X0 464 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms