RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 TMEM56Q96MV1 263 aa4.66□□□□□ -1.66
LIMA1-212ENST00000552491 ALKBH3Q96Q83 286 aaPredicted RBP4.66□□□□□ -1.66
LIMA1-212ENST00000552491 FGF23Q9GZV9 251 aaPredicted RBP4.66□□□□□ -1.66
LIMA1-212ENST00000552491 OPA3Q9H6K4 179 aa4.66□□□□□ -1.66
LIMA1-212ENST00000552491 ZNF442Q9H7R0 627 aa4.66□□□□□ -1.66
LIMA1-212ENST00000552491 CRLF2Q9HC73 371 aa4.66□□□□□ -1.66
LIMA1-212ENST00000552491 SIRT7Q9NRC8 400 aa4.66□□□□□ -1.66
LIMA1-212ENST00000552491 LYRM2Q9NU23 88 aaPredicted RBP4.66□□□□□ -1.66
LIMA1-212ENST00000552491 IL36GQ9NZH8 169 aa4.66□□□□□ -1.66
LIMA1-212ENST00000552491 IL36RNQ9UBH0 155 aa4.66□□□□□ -1.66
LIMA1-212ENST00000552491 CA14Q9ULX7 337 aa4.66□□□□□ -1.66
LIMA1-212ENST00000552491 TMEM56-RWDD3S4R434 201 aa4.66□□□□□ -1.66
LIMA1-212ENST00000552491 TRIOBPQ9H2D6 2365 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 IGKV1-6A0A0C4DH72 117 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 hCG_38984A0A1B0GV85 526 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 OR6C6A6NF89 314 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 TP53I11O14683 189 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 TOX3O15405 576 aaPredicted RBP4.65□□□□□ -1.66
LIMA1-212ENST00000552491 CHST1O43916 411 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 OR7C1O76099 320 aaPredicted RBP4.65□□□□□ -1.66
LIMA1-212ENST00000552491 JMJD7P0C870 316 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 LIFP15018 202 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 TCN2P20062 427 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 SPINK2P20155 84 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 PSG4Q00888 419 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 ID3Q02535 119 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 MALLQ13021 153 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 PCOLCEQ15113 449 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 RAB35Q15286 201 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 KRTAP27-1Q3LI81 207 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 ZNF506Q5JVG8 444 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 SLC23A3Q6PIS1 610 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 GAPTQ8N292 157 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 C17orf78Q8N4C9 275 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 PIGCQ92535 297 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 TVP23CQ96ET8 276 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 PFDN5Q99471 154 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 SPIN2AQ99865 258 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 SSX3Q99909 188 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 SPIN2BQ9BPZ2 258 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 NIPSNAP3BQ9BS92 247 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 WSB1Q9Y6I7 421 aa4.65□□□□□ -1.66
LIMA1-212ENST00000552491 ESPL1Q14674 2120 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 LY6G6EA0A0G2JKS1 128 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 A0A0G2JMM0 328 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 IGHV5-10-1A0A0J9YXX1 117 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 A0A1W2PPB8 328 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 A0A1W2PRS3 328 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 CLEC18AA5D8T8 446 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 KIR3DP1A8MWS1 328 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 SEC14L6B5MCN3 397 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 H3BP45 60 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 RPL36A-HNRNPH2H7BZ11 118 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 PHOX2AO14813 284 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 CYB5BO43169 146 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 TNFSF12O43508 249 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 CEACAM1P13688 526 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 EDN3P14138 238 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 FUT3P21217 361 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 MDKP21741 143 aaPredicted RBP4.65□□□□□ -1.67
LIMA1-212ENST00000552491 GLIPR1P48060 266 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 FUT6P51993 359 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 VAMP2P63027 116 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 ZFP36L1Q07352 338 aaKnown RBP4.65□□□□□ -1.67
LIMA1-212ENST00000552491 KHDC3LQ587J8 217 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 SPIN3Q5JUX0 258 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 PLCXD3Q63HM9 321 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 FAM90A2PQ658T7 463 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 SLC25A26Q70HW3 274 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 SSX7Q7RTT5 188 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 SLC35E3Q7Z769 313 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 DPPA2Q7Z7J5 298 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 ZNF695Q8IW36 515 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 HIST3H2BBQ8N257 126 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 ZNF611Q8N823 705 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 CLEC18CQ8NCF0 446 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 OR13D1Q8NGV5 346 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 FRZBQ92765 325 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 RBMXL1Q96E39 390 aaKnown RBP4.65□□□□□ -1.67
LIMA1-212ENST00000552491 WNT5BQ9H1J7 359 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 PCED1AQ9H1Q7 454 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 VSIRQ9H7M9 311 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 CCL28Q9NRJ3 127 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 TMEM38BQ9NVV0 291 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 OCIAD1Q9NX40 245 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 TAAR3PQ9P1P4 343 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 ZNF391Q9UJN7 358 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 UBE2J1Q9Y385 318 aaPredicted RBP4.65□□□□□ -1.67
LIMA1-212ENST00000552491 RNF115Q9Y4L5 304 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 U3KQA8 63 aa4.65□□□□□ -1.67
LIMA1-212ENST00000552491 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.64□□□□□ -1.67
LIMA1-212ENST00000552491 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.64□□□□□ -1.67
LIMA1-212ENST00000552491 DUXBA0A1W2PPF3 345 aa4.64□□□□□ -1.67
LIMA1-212ENST00000552491 SLC22A20A6NK97 555 aa4.64□□□□□ -1.67
LIMA1-212ENST00000552491 B4DEV8 164 aa4.64□□□□□ -1.67
LIMA1-212ENST00000552491 HSPB6O14558 160 aa4.64□□□□□ -1.67
LIMA1-212ENST00000552491 F10P00742 488 aa4.64□□□□□ -1.67
LIMA1-212ENST00000552491 HBE1P02100 147 aa4.64□□□□□ -1.67
LIMA1-212ENST00000552491 CST2P09228 141 aa4.64□□□□□ -1.67
LIMA1-212ENST00000552491 TRGC1P0CF51 173 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms