RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 TP53RKQ96S44 253 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 CCL28Q9NRJ3 127 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 DCAF16Q9NXF7 216 aa11.91□□□□□ -0.5
ACTN1-205ENST00000538545 CRYM-AS1A6NIL9 109 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 ABCD4O14678 606 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 SPDEFO95238 335 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 IFNA2P01563 188 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 CD40P25942 277 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 GRNP28799 593 aaKnown RBP11.9□□□□□ -0.5
ACTN1-205ENST00000538545 HERV-K104P61576 105 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 MBNL2Q5VZF2 373 aaKnown RBP11.9□□□□□ -0.5
ACTN1-205ENST00000538545 C11orf87Q6NUJ2 197 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 ADAM5Q6NVV9 412 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 GSG1LQ6UXU4 331 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 LYZL2Q7Z4W2 148 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 SGPP2Q8IWX5 399 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 MOB3AQ96BX8 217 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 CITED4Q96RK1 184 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 CXXC4Q9H2H0 198 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 OR5AC2Q9NZP5 309 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 COMMD9Q9P000 198 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 TRAPPC2LQ9UL33 140 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 ATP23Q9Y6H3 246 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 HRNRQ86YZ3 2850 aaPredicted RBP11.9□□□□□ -0.5
ACTN1-205ENST00000538545 CD8AP01732 235 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 THBDP07204 575 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 S100A11P31949 105 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 NKX6-1P78426 367 aaPredicted RBP11.9□□□□□ -0.5
ACTN1-205ENST00000538545 RBM39Q14498 530 aaKnown RBP11.9□□□□□ -0.5
ACTN1-205ENST00000538545 CDSNQ15517 529 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 GAPTQ8N292 157 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 SCGB3A2Q96PL1 93 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 PLK3Q9H4B4 646 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 DECR2Q9NUI1 292 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 TAAR3PQ9P1P4 343 aa11.9□□□□□ -0.5
ACTN1-205ENST00000538545 DPRXA6NFQ7 191 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 TRDCB7Z8K6 153 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 SELLP14151 372 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 PMELP40967 661 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 RAB32Q13637 225 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 IL13RA2Q14627 380 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 MOGAT3Q86VF5 341 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 LILRB4Q8NHJ6 448 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 COQ8AQ8NI60 647 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 RRNAD1Q96FB5 475 aaKnown RBP11.89□□□□□ -0.51
ACTN1-205ENST00000538545 RASL12Q9NYN1 266 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 ZNF835Q9Y2P0 537 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 RNF222A6NCQ9 220 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 MSGN1A6NI15 193 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 C16orf97H3BN30 126 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 PHF1O43189 567 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-205ENST00000538545 TK1P04183 234 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 S100A10P60903 97 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 ACP7Q6ZNF0 438 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 POC1AQ8NBT0 407 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 GALNT11Q8NCW6 608 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 ITLN1Q8WWA0 313 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 NEUROG1Q92886 237 aa11.89□□□□□ -0.51
ACTN1-205ENST00000538545 FBXO9Q9UK97 447 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-205ENST00000538545 YLPM1P49750 1951 aaKnown RBP11.89□□□□□ -0.51
ACTN1-205ENST00000538545 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-205ENST00000538545 A0A1B0GW55 424 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 SCGB1D2O95969 90 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 DUX4L2P0CJ85 424 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 DUX4L3P0CJ86 424 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 DUX4L4P0CJ87 422 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 DUX4L5P0CJ88 424 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 DUX4L6P0CJ89 424 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 DUX4L7P0CJ90 424 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 KLF3P57682 345 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-205ENST00000538545 ZNF146Q15072 292 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 DUX4L9Q6RFH8 374 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-205ENST00000538545 CLEC9AQ6UXN8 241 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 UNQ6126/PRO20091Q6UXV3 157 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 GLYATL2Q8WU03 294 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 RNF126Q9BV68 326 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 DUX4Q9UBX2 424 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 ERRFI1Q9UJM3 462 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-205ENST00000538545 DYSFO75923 2080 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-205ENST00000538545 SH2D1BO14796 132 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 NXPH3O95157 252 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 IGHV3-13P01766 116 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 IGHV3-7P01780 117 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 HLA-GP17693 338 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 GLRXP35754 106 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 COL10A1Q03692 680 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 BSPH1Q075Z2 132 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 EDDM3AQ14507 147 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 SURF2Q15527 256 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-205ENST00000538545 LTC4SQ16873 150 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 EIF2S3LQ2VIR3 472 aaKnown RBP11.88□□□□□ -0.51
ACTN1-205ENST00000538545 GGNBP1Q5YKI7 109 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 MRGPRGQ86SM5 289 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 RFESDQ8TAC1 157 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 SLC5A7Q9GZV3 580 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 NAA60Q9H7X0 242 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 KIF25Q9UIL4 384 aa11.88□□□□□ -0.51
ACTN1-205ENST00000538545 HMSDA8MTL9 139 aa11.87□□□□□ -0.51
ACTN1-205ENST00000538545 GLIPR1P48060 266 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms