RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 MUC1P15941 1255 aaPredicted RBP11.39□□□□□ -0.59
VPS33B-202ENST00000535906 GNRHRP30968 328 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 NOVA1P51513 510 aaKnown RBP11.39□□□□□ -0.59
VPS33B-202ENST00000535906 ALKBH6Q3KRA9 238 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 WDR86Q86TI4 376 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 LGI3Q8N145 548 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 FAM58AQ8N1B3 248 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 RDH5Q92781 318 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 ADAT1Q9BUB4 502 aaKnown RBP11.39□□□□□ -0.59
VPS33B-202ENST00000535906 PLK3Q9H4B4 646 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 PLA2G2EQ9NZK7 142 aa11.39□□□□□ -0.59
VPS33B-202ENST00000535906 TRAV24A0A0B4J272 114 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 NUBP1P53384 320 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 F2RL1P55085 397 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 MRPL49Q13405 166 aaKnown RBP11.38□□□□□ -0.59
VPS33B-202ENST00000535906 DHRS7BQ6IAN0 325 aaPredicted RBP11.38□□□□□ -0.59
VPS33B-202ENST00000535906 TMEM88Q6PEY1 159 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 CCDC71LQ8N9Z2 235 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 ERGIC1Q969X5 290 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 TP53RKQ96S44 253 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 SMIM3Q9BZL3 60 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 PKIBQ9C010 78 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 CDH20Q9HBT6 801 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 NDRG3Q9UGV2 375 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 FAM96BQ9Y3D0 163 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 SVILO95425 2214 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 ZFHX2Q9C0A1 2572 aaPredicted RBP11.38□□□□□ -0.59
VPS33B-202ENST00000535906 IGKV1-6A0A0C4DH72 117 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 J3QW42 95 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 PHF1O43189 567 aaPredicted RBP11.38□□□□□ -0.59
VPS33B-202ENST00000535906 FOXF2Q12947 444 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 LINC00596Q86U02 117 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 SLC25A40Q8TBP6 338 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 TAAR6Q96RI8 345 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 ARV1Q9H2C2 271 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 ATP23Q9Y6H3 246 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 MGAQ8IWI9 3026 aa11.38□□□□□ -0.59
VPS33B-202ENST00000535906 RNASEK-C17orf49H0YIS7 233 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 J3QT63 122 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 DIRAS3O95661 229 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 TK1P04183 234 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 CD5P06127 495 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 KCNJ3P48549 501 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 UCP2P55851 309 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 FAM76BQ5HYJ3 339 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 GPR157Q5UAW9 335 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 LYPD6BQ8NI32 183 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 MRPL30Q8TCC3 161 aaKnown RBP11.37□□□□□ -0.59
VPS33B-202ENST00000535906 SARAFQ96BY9 339 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 FBXO9Q9UK97 447 aaPredicted RBP11.37□□□□□ -0.59
VPS33B-202ENST00000535906 TMED3Q9Y3Q3 217 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 POMT1Q9Y6A1 747 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 CACNA1GO43497 2377 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 AKAP13Q12802 2813 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 IGKV1D-13A0A0B4J2D9 117 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 IGHV3-64DA0A0J9YX35 117 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 TRDCB7Z8K6 153 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 MPPED1O15442 326 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 GPR137BO60478 399 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 CEACAM4O75871 244 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 AGFG2O95081 481 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 IGKV1-13P0DP09 117 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 FLI1Q01543 452 aaPredicted RBP11.37□□□□□ -0.59
VPS33B-202ENST00000535906 IL13RA2Q14627 380 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 INO80CQ6PI98 192 aaPredicted RBP11.37□□□□□ -0.59
VPS33B-202ENST00000535906 Q6ZRG5 221 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 SCCPDHQ8NBX0 429 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 OR52M1Q8NGK5 317 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 OR1J1Q8NGS3 322 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 SECTM1Q8WVN6 248 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 GPHA2Q96T91 129 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 RTL8AQ9BWD3 113 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 SPACA1Q9HBV2 294 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 DLL3Q9NYJ7 618 aa11.37□□□□□ -0.59
VPS33B-202ENST00000535906 INTS1Q8N201 2190 aaKnown RBP11.36□□□□□ -0.59
VPS33B-202ENST00000535906 KIR2DS1A0A191URI9 304 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 C3orf85A0A1B0GTC6 90 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 SLC34A2O95436 690 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 F12P00748 615 aaPredicted RBP11.36□□□□□ -0.59
VPS33B-202ENST00000535906 KIR2DS4P43632 304 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 P2RY1P47900 373 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 NPBWR1P48145 328 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 PSG7Q13046 419 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 KIR2DS1Q14954 304 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 SWI5Q1ZZU3 235 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 HFEQ30201 348 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 ZNF818PQ6ZRF7 136 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 CBLN2Q8IUK8 224 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 FAM185AQ8N0U4 392 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 WDR31Q8NA23 367 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 PRSS33Q8NF86 280 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 GTF3AQ92664 365 aaKnown RBP11.36□□□□□ -0.59
VPS33B-202ENST00000535906 FAM212BQ9NTI7 297 aaPredicted RBP11.36□□□□□ -0.59
VPS33B-202ENST00000535906 ZNF891A8MT65 544 aaPredicted RBP11.36□□□□□ -0.59
VPS33B-202ENST00000535906 H7C2Y5 167 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 ST8SIA3O43173 380 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 CNOT4O95628 575 aaKnown RBP11.36□□□□□ -0.59
VPS33B-202ENST00000535906 SFTA3P0C7M3 94 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 SEC11BP0C7V7 166 aa11.36□□□□□ -0.59
VPS33B-202ENST00000535906 RAC2P15153 192 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms