RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 RIMS4Q9H426 269 aaPredicted RBP12.86□□□□□ -0.35
CNN1-202ENST00000535659 AUNIPQ9H7T9 357 aa12.86□□□□□ -0.35
CNN1-202ENST00000535659 EXTL2Q9UBQ6 330 aa12.86□□□□□ -0.35
CNN1-202ENST00000535659 LPAR3Q9UBY5 353 aa12.86□□□□□ -0.35
CNN1-202ENST00000535659 FLNAP21333 2647 aaKnown RBP12.85□□□□□ -0.35
CNN1-202ENST00000535659 IGHV2-70DA0A0C4DH43 119 aa12.85□□□□□ -0.35
CNN1-202ENST00000535659 A0A1W2PQ09 198 aa12.85□□□□□ -0.35
CNN1-202ENST00000535659 ENSAO43768 121 aaKnown RBP12.85□□□□□ -0.35
CNN1-202ENST00000535659 CLPXO76031 633 aa12.85□□□□□ -0.35
CNN1-202ENST00000535659 MELTFP08582 738 aa12.85□□□□□ -0.35
CNN1-202ENST00000535659 INHBBP09529 407 aa12.85□□□□□ -0.35
CNN1-202ENST00000535659 CD99P14209 185 aa12.85□□□□□ -0.35
CNN1-202ENST00000535659 FOSL1P15407 271 aa12.85□□□□□ -0.35
CNN1-202ENST00000535659 TALDO1P37837 337 aa12.85□□□□□ -0.35
CNN1-202ENST00000535659 MNDAP41218 407 aa12.85□□□□□ -0.35
CNN1-202ENST00000535659 PNLIPRP3Q17RR3 467 aa12.85□□□□□ -0.35
CNN1-202ENST00000535659 HACD4Q5VWC8 232 aa12.85□□□□□ -0.35
CNN1-202ENST00000535659 CNIH2Q6PI25 160 aa12.85□□□□□ -0.35
CNN1-202ENST00000535659 DACT3Q96B18 629 aaPredicted RBP12.85□□□□□ -0.35
CNN1-202ENST00000535659 TMEM186Q96B77 213 aa12.85□□□□□ -0.35
CNN1-202ENST00000535659 OR6C3Q9NZP0 311 aa12.85□□□□□ -0.35
CNN1-202ENST00000535659 ELF5Q9UKW6 265 aaPredicted RBP12.85□□□□□ -0.35
CNN1-202ENST00000535659 MRPS7Q9Y2R9 242 aaKnown RBP12.85□□□□□ -0.35
CNN1-202ENST00000535659 CR1P17927 2039 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 A0A1W2PPH5 198 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 POM121CA8CG34 1229 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 TPPPO94811 219 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 NAPSAO96009 420 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 HLA-DQB1P01920 261 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 CD3GP09693 182 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 GZMHP20718 246 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 TAS2R20P59543 309 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 MRPS15P82914 257 aaKnown RBP12.84□□□□□ -0.35
CNN1-202ENST00000535659 ARFRP1Q13795 201 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 BTNL3Q6UXE8 466 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 GLCCI1Q86VQ1 547 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 OR6Q1Q8NGQ2 317 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 OR4K15Q8NH41 348 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 MRPL30Q8TCC3 161 aaKnown RBP12.84□□□□□ -0.35
CNN1-202ENST00000535659 CCDC107Q8WV48 283 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 WDFY2Q96P53 400 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 HIF1ANQ9NWT6 349 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 TRAPPC2LQ9UL33 140 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 UBE2J1Q9Y385 318 aaPredicted RBP12.84□□□□□ -0.35
CNN1-202ENST00000535659 INSIG2Q9Y5U4 225 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 LINC00312Q9Y6C7 94 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 YLPM1P49750 1951 aaKnown RBP12.84□□□□□ -0.35
CNN1-202ENST00000535659 SVEP1Q4LDE5 3571 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 DOCK11Q5JSL3 2073 aa12.84□□□□□ -0.35
CNN1-202ENST00000535659 TRGV10A0A0A0MS01 117 aa12.83□□□□□ -0.35
CNN1-202ENST00000535659 MEX3AA1L020 520 aaKnown RBP12.83□□□□□ -0.35
CNN1-202ENST00000535659 TMEM235A6NFC5 223 aa12.83□□□□□ -0.35
CNN1-202ENST00000535659 DVL1P1P54792 670 aaPredicted RBP12.83□□□□□ -0.35
CNN1-202ENST00000535659 PITPNAQ00169 270 aa12.83□□□□□ -0.35
CNN1-202ENST00000535659 ZNF273Q14593 569 aa12.83□□□□□ -0.35
CNN1-202ENST00000535659 CR1LQ2VPA4 569 aa12.83□□□□□ -0.35
CNN1-202ENST00000535659 TRAPPC6BQ86SZ2 158 aa12.83□□□□□ -0.35
CNN1-202ENST00000535659 OR13A1Q8NGR1 328 aa12.83□□□□□ -0.35
CNN1-202ENST00000535659 HDHD3Q9BSH5 251 aaPredicted RBP12.83□□□□□ -0.35
CNN1-202ENST00000535659 CHMP1AQ9HD42 196 aaPredicted RBP12.83□□□□□ -0.35
CNN1-202ENST00000535659 C12orf4Q9NQ89 552 aa12.83□□□□□ -0.35
CNN1-202ENST00000535659 PTTG2Q9NZH5 202 aa12.83□□□□□ -0.35
CNN1-202ENST00000535659 TRAV39A0A0B4J263 110 aa12.83□□□□□ -0.36
CNN1-202ENST00000535659 CGB3P0DN86 165 aa12.83□□□□□ -0.36
CNN1-202ENST00000535659 CGB7P0DN87 165 aa12.83□□□□□ -0.36
CNN1-202ENST00000535659 GATA3P23771 443 aa12.83□□□□□ -0.36
CNN1-202ENST00000535659 GNG2P59768 71 aa12.83□□□□□ -0.36
CNN1-202ENST00000535659 ARF6P62330 175 aa12.83□□□□□ -0.36
CNN1-202ENST00000535659 PAX8Q06710 450 aa12.83□□□□□ -0.36
CNN1-202ENST00000535659 DCAF12L2Q5VW00 463 aa12.83□□□□□ -0.36
CNN1-202ENST00000535659 FAHD2BQ6P2I3 314 aaPredicted RBP12.83□□□□□ -0.36
CNN1-202ENST00000535659 TCF23Q7RTU1 214 aa12.83□□□□□ -0.36
CNN1-202ENST00000535659 MRGPRDQ8TDS7 321 aa12.83□□□□□ -0.36
CNN1-202ENST00000535659 C15orf40Q8WUR7 153 aa12.83□□□□□ -0.36
CNN1-202ENST00000535659 FAHD2AQ96GK7 314 aa12.83□□□□□ -0.36
CNN1-202ENST00000535659 TAS2R3Q9NYW6 316 aa12.83□□□□□ -0.36
CNN1-202ENST00000535659 ARHGAP32A7KAX9 2087 aa12.82□□□□□ -0.36
CNN1-202ENST00000535659 SETD2Q9BYW2 2564 aaPredicted RBP12.82□□□□□ -0.36
CNN1-202ENST00000535659 HIVEP1P15822 2718 aa12.82□□□□□ -0.36
CNN1-202ENST00000535659 TRBV6-6A0A0A6YYG2 114 aa12.82□□□□□ -0.36
CNN1-202ENST00000535659 A0A0G2JMP0 313 aa12.82□□□□□ -0.36
CNN1-202ENST00000535659 A0A0X1KG70 313 aa12.82□□□□□ -0.36
CNN1-202ENST00000535659 FABP12A6NFH5 140 aa12.82□□□□□ -0.36
CNN1-202ENST00000535659 ZNF728P0DKX0 622 aa12.82□□□□□ -0.36
CNN1-202ENST00000535659 PTHLHP12272 177 aa12.82□□□□□ -0.36
CNN1-202ENST00000535659 CCL3L1P16619 93 aa12.82□□□□□ -0.36
CNN1-202ENST00000535659 RCC1P18754 421 aaPredicted RBP12.82□□□□□ -0.36
CNN1-202ENST00000535659 PRSS3P35030 304 aa12.82□□□□□ -0.36
CNN1-202ENST00000535659 MADCAM1Q13477 382 aa12.82□□□□□ -0.36
CNN1-202ENST00000535659 ZNF880Q6PDB4 577 aa12.82□□□□□ -0.36
CNN1-202ENST00000535659 BAIAP2L2Q6UXY1 529 aa12.82□□□□□ -0.36
CNN1-202ENST00000535659 C1orf122Q6ZSJ8 110 aa12.82□□□□□ -0.36
CNN1-202ENST00000535659 OR4M2Q8NGB6 313 aa12.82□□□□□ -0.36
CNN1-202ENST00000535659 ZNF714Q96N38 554 aa12.82□□□□□ -0.36
CNN1-202ENST00000535659 SOSTQ9BQB4 213 aa12.82□□□□□ -0.36
CNN1-202ENST00000535659 MBNL3Q9NUK0 354 aaKnown RBP12.82□□□□□ -0.36
CNN1-202ENST00000535659 ONECUT1Q9UBC0 465 aa12.82□□□□□ -0.36
CNN1-202ENST00000535659 RABL2AQ9UBK7 228 aaPredicted RBP12.82□□□□□ -0.36
CNN1-202ENST00000535659 RABL2BQ9UNT1 228 aa12.82□□□□□ -0.36
CNN1-202ENST00000535659 ZANQ9Y493 2812 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms