RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 NCR3LG1Q68D85 454 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 C16orf82Q7Z2V1 217 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 GAPTQ8N292 157 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 NECAP1Q8NC96 275 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 PLPPR1Q8TBJ4 325 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 NABP1Q96AH0 204 aa12.64□□□□□ -0.39
CAPN1-214ENST00000528165 LOC102725191A0A1B0GVB3 256 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 C10orf142B7Z368 130 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 TNFSF12O43508 249 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 IFNA1P01562 189 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 G0S2P27469 103 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 HIST1H3AP68431 136 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 P2RY6Q15077 328 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 C10orf128Q5T292 105 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 FAM69BQ5VUD6 431 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 ZNF818PQ6ZRF7 136 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 ACY3Q96HD9 319 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 NAT8Q9UHE5 227 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 EXPH5Q8NEV8 1989 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 A0A1W2PPC4 97 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 OR7C1O76099 320 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-214ENST00000528165 NRASP01111 189 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 PFN1P07737 140 aaKnown RBP12.63□□□□□ -0.39
CAPN1-214ENST00000528165 IDH3GP51553 393 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-214ENST00000528165 PAX9P55771 341 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 RPS18P62269 152 aaKnown RBP12.63□□□□□ -0.39
CAPN1-214ENST00000528165 TMEM267Q0VDI3 215 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-214ENST00000528165 FAM180AQ6UWF9 173 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 OR10G3Q8NGC4 313 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 MBD3L1Q8WWY6 194 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 OR5B12Q96R08 314 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 SMIM7Q9BQ49 75 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 Q9N2K0 584 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 RNF115Q9Y4L5 304 aa12.63□□□□□ -0.39
CAPN1-214ENST00000528165 LINC01565O15544 149 aa12.62□□□□□ -0.39
CAPN1-214ENST00000528165 DHHO43323 396 aa12.62□□□□□ -0.39
CAPN1-214ENST00000528165 UCP1P25874 307 aa12.62□□□□□ -0.39
CAPN1-214ENST00000528165 NPBWR2P48146 333 aa12.62□□□□□ -0.39
CAPN1-214ENST00000528165 ERVS71-1P61550 626 aa12.62□□□□□ -0.39
CAPN1-214ENST00000528165 MRGPRGQ86SM5 289 aa12.62□□□□□ -0.39
CAPN1-214ENST00000528165 TGIF2LYQ8IUE0 185 aa12.62□□□□□ -0.39
CAPN1-214ENST00000528165 MAML2Q8IZL2 1156 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-214ENST00000528165 DNASE2BQ8WZ79 361 aa12.62□□□□□ -0.39
CAPN1-214ENST00000528165 TMEM18Q96B42 140 aa12.62□□□□□ -0.39
CAPN1-214ENST00000528165 VSIRQ9H7M9 311 aa12.62□□□□□ -0.39
CAPN1-214ENST00000528165 RNF150Q9ULK6 438 aa12.62□□□□□ -0.39
CAPN1-214ENST00000528165 KIAA0100Q14667 2235 aaKnown RBP12.62□□□□□ -0.39
CAPN1-214ENST00000528165 COX5BP10606 129 aa12.62□□□□□ -0.39
CAPN1-214ENST00000528165 PTGDSP41222 190 aa12.62□□□□□ -0.39
CAPN1-214ENST00000528165 NFAM1Q8NET5 270 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-214ENST00000528165 OR2M3Q8NG83 312 aa12.62□□□□□ -0.39
CAPN1-214ENST00000528165 PYGO2Q9BRQ0 406 aa12.62□□□□□ -0.39
CAPN1-214ENST00000528165 ATG2AQ2TAZ0 1938 aa12.62□□□□□ -0.39
CAPN1-214ENST00000528165 IGLV3-32A0A0A0MS00 114 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 RBM11P57052 281 aaKnown RBP12.61□□□□□ -0.39
CAPN1-214ENST00000528165 PAX5Q02548 391 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 DLX2Q07687 328 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-214ENST00000528165 PMS2P11Q13670 270 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 ZNF726P1Q15940 193 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 IQCJQ1A5X6 159 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 TMEM241Q24JQ0 296 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 ANKRD37Q7Z713 158 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 MRPL41Q8IXM3 137 aaKnown RBP12.61□□□□□ -0.39
CAPN1-214ENST00000528165 RNF138Q8WVD3 245 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 ADGRG7Q96K78 797 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 SNHG12Q9BXW3 62 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 IL36GQ9NZH8 169 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 TAAR3PQ9P1P4 343 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 PRSS50Q9UI38 385 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 H7BYZ3 331 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 LCATP04180 440 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 GALR1P47211 349 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 OR1D5P58170 312 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 TMEM54Q969K7 222 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 RBKSQ9H477 322 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 MMP17Q9ULZ9 603 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 FAM3BP58499 235 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-214ENST00000528165 CYB5R2Q6BCY4 276 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 FOXL2NBQ6ZUU3 175 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 OR51G1Q8NGK1 321 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 ZNF385AQ96PM9 386 aaKnown RBP12.61□□□□□ -0.39
CAPN1-214ENST00000528165 CDCA3Q99618 268 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-214ENST00000528165 PPP1R14DQ9NXH3 145 aa12.61□□□□□ -0.39
CAPN1-214ENST00000528165 FER1L5A0AVI2 2057 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 NPIPA2E9PIF3 369 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 NPIPA3F8WFD2 350 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 M0R143 59 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 OR4A8P0C604 315 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 PDLIM4P50479 330 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 HNF4GQ14541 408 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 BSXQ3C1V8 233 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 CYP2G1PQ6ZSU1 146 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 SSX7Q7RTT5 188 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 OR5D13Q8NGL4 314 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 TMEM170AQ8WVE7 144 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 TMEM37Q8WXS4 190 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 ULBP2Q9BZM5 246 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 MAP1LC3B2A6NCE7 125 aa12.6□□□□□ -0.39
CAPN1-214ENST00000528165 MMP7P09237 267 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-214ENST00000528165 GZMHP20718 246 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms