RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 PSPNO60542 156 aa13.4□□□□□ -0.26
NUP54-214ENST00000514307 CD80P33681 288 aa13.4□□□□□ -0.26
NUP54-214ENST00000514307 FAHD2BQ6P2I3 314 aaPredicted RBP13.4□□□□□ -0.26
NUP54-214ENST00000514307 C17orf107Q6ZR85 190 aa13.4□□□□□ -0.26
NUP54-214ENST00000514307 SLC36A1Q7Z2H8 476 aa13.4□□□□□ -0.26
NUP54-214ENST00000514307 OR13C8Q8NGS7 320 aa13.4□□□□□ -0.26
NUP54-214ENST00000514307 PLPPR1Q8TBJ4 325 aa13.4□□□□□ -0.26
NUP54-214ENST00000514307 FAHD2AQ96GK7 314 aa13.4□□□□□ -0.26
NUP54-214ENST00000514307 ZNF2Q9BSG1 426 aaPredicted RBP13.4□□□□□ -0.26
NUP54-214ENST00000514307 MED28Q9H204 178 aa13.4□□□□□ -0.26
NUP54-214ENST00000514307 OR51J1Q9H342 316 aa13.4□□□□□ -0.26
NUP54-214ENST00000514307 OPN4Q9UHM6 478 aa13.4□□□□□ -0.26
NUP54-214ENST00000514307 PCNX1Q96RV3 2341 aa13.4□□□□□ -0.26
NUP54-214ENST00000514307 MEIKINA0A087WXM9 373 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 C7orf66A4D0T2 115 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 CEACAM18A8MTB9 384 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 DANCRP0C864 163 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 ERP29P30040 261 aaKnown RBP13.39□□□□□ -0.27
NUP54-214ENST00000514307 FCGR2CP31995 323 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 OR3A1P47881 315 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 CEBPDP49716 269 aaPredicted RBP13.39□□□□□ -0.27
NUP54-214ENST00000514307 UBE2MP61081 183 aaKnown RBP13.39□□□□□ -0.27
NUP54-214ENST00000514307 HERV-K104P61576 105 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 IL13RA1P78552 427 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 AESQ08117 197 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 ATXN7L3Q14CW9 347 aaPredicted RBP13.39□□□□□ -0.27
NUP54-214ENST00000514307 STUMQ69YW2 141 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 GLDNQ6ZMI3 551 aaPredicted RBP13.39□□□□□ -0.27
NUP54-214ENST00000514307 ZNF788Q6ZQV5 615 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 SLC25A42Q86VD7 318 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 LHFPL1Q86WI0 220 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 OR10J5Q8NHC4 309 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 TRAF4Q9BUZ4 470 aaPredicted RBP13.39□□□□□ -0.27
NUP54-214ENST00000514307 SHARPINQ9H0F6 387 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 GHITMQ9H3K2 345 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 MBNL3Q9NUK0 354 aaKnown RBP13.39□□□□□ -0.27
NUP54-214ENST00000514307 ING3Q9NXR8 418 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 ZNF222Q9UK12 451 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 GPR132Q9UNW8 380 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 C14orf166Q9Y224 244 aaKnown RBP13.39□□□□□ -0.27
NUP54-214ENST00000514307 PRR14LQ5THK1 2151 aa13.39□□□□□ -0.27
NUP54-214ENST00000514307 FAM172BPA6NC97 362 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 CREBL2O60519 120 aaPredicted RBP13.38□□□□□ -0.27
NUP54-214ENST00000514307 ZNF737O75373 536 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 CD8AP01732 235 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 HPXP02790 462 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 SCTP09683 121 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 PGAM2P15259 253 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 RCC1P18754 421 aaPredicted RBP13.38□□□□□ -0.27
NUP54-214ENST00000514307 ANXA7P20073 488 aaKnown RBP13.38□□□□□ -0.27
NUP54-214ENST00000514307 FPR2P25090 351 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 NPY4RP50391 375 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 UCP3P55916 312 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 HLA-DRB3P79483 266 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 CBX3Q13185 183 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 C4orf46Q504U0 113 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 TMED4Q7Z7H5 227 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 AKAP14Q86UN6 197 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 TMEM185AQ8NFB2 350 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 MARCH1Q8TCQ1 289 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 GALMQ96C23 342 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 UBTD1Q9HAC8 227 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 TAF9BQ9HBM6 251 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 OR6C3Q9NZP0 311 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 KIF25Q9UIL4 384 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 NBASA2RRP1 2371 aa13.38□□□□□ -0.27
NUP54-214ENST00000514307 J3QKU1 62 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 BET1O15155 118 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 SIGLEC5O15389 551 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 SPINT2O43291 252 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 SSNA1O43805 119 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 GYPAP02724 150 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 ZNF728P0DKX0 622 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 RRAS2P62070 204 aaPredicted RBP13.37□□□□□ -0.27
NUP54-214ENST00000514307 TLE4Q04727 773 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 CARTPTQ16568 116 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 FAM201AQ5SY85 155 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 CD276Q5ZPR3 534 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 C11orf71Q6IPW1 123 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 C20orf204Q6ZNR8 217 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 RAB1CQ92928 201 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 TIMD4Q96H15 378 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 CCL13Q99616 98 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 BEX2Q9BXY8 128 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 CLEC4MQ9H2X3 399 aaPredicted RBP13.37□□□□□ -0.27
NUP54-214ENST00000514307 BEX1Q9HBH7 125 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 LAMP3Q9UQV4 416 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 MAB21L2Q9Y586 359 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 TENM4Q6N022 2769 aa13.37□□□□□ -0.27
NUP54-214ENST00000514307 HSPA12AO43301 675 aa13.36□□□□□ -0.27
NUP54-214ENST00000514307 NDUFB3O43676 98 aa13.36□□□□□ -0.27
NUP54-214ENST00000514307 CCNKO75909 580 aa13.36□□□□□ -0.27
NUP54-214ENST00000514307 SOD3P08294 240 aa13.36□□□□□ -0.27
NUP54-214ENST00000514307 OR4E1P0C645 316 aa13.36□□□□□ -0.27
NUP54-214ENST00000514307 ZBTB25P24278 435 aa13.36□□□□□ -0.27
NUP54-214ENST00000514307 S100GP29377 79 aa13.36□□□□□ -0.27
NUP54-214ENST00000514307 IL2RGP31785 369 aa13.36□□□□□ -0.27
NUP54-214ENST00000514307 GLIPR1P48060 266 aa13.36□□□□□ -0.27
NUP54-214ENST00000514307 TMEM33P57088 247 aa13.36□□□□□ -0.27
NUP54-214ENST00000514307 TMEM128Q5BJH2 165 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms