RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 ACTBP60709 375 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 ACTG1P63261 375 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 RPP30P78346 268 aaKnown RBP4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 QRFPP83859 136 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 ZNF92Q03936 586 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 PPA1Q15181 289 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 KISS1Q15726 138 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 UBE2V2Q15819 145 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 HIKESHIQ53FT3 197 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 C9orf135Q5VTT2 229 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 FBXW12Q6X9E4 464 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 ASCL4Q6XD76 172 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 MRPL21Q7Z2W9 205 aaKnown RBP4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 NAA40Q86UY6 237 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 DOLPP1Q86YN1 238 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 ZNF584Q8IVC4 421 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 SAXO1Q8IYX7 474 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 ZSCAN4Q8NAM6 433 aaPredicted RBP4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 PXT1Q8NFP0 134 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 OR4M2Q8NGB6 313 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 OR51D1Q8NGF3 324 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 OR4D6Q8NGJ1 314 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 YIPF5Q969M3 257 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 TRIM63Q969Q1 353 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 FAM46BQ96A09 425 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 SNRNP40Q96DI7 357 aaKnown RBP4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 MRPS24Q96EL2 167 aaKnown RBP4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 BORCS8Q96FH0 119 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 ABHD1Q96SE0 405 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 GPER1Q99527 375 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 S100A13Q99584 98 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 PCGF1Q9BSM1 259 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 TMEM59Q9BXS4 323 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 BCL2L14Q9BZR8 327 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 RHOFQ9HBH0 211 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 NOX3Q9HBY0 568 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 FAIMQ9NVQ4 179 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 RBFOX1Q9NWB1 397 aaKnown RBP4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 PPP1R14DQ9NXH3 145 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 IL36GQ9NZH8 169 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 COPZ2Q9P299 210 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 TBC1D24Q9ULP9 559 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 MRPS28Q9Y2Q9 187 aaKnown RBP4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 RBMX2Q9Y388 322 aaKnown RBP4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 N6AMT1Q9Y5N5 214 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 NCOR2Q9Y618 2525 aa4.06□□□□□ -1.76
DEPDC1B-203ENST00000505017 IGKV1-9A0A0C4DH69 117 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 C5orf63A6NC05 138 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 OR5B21A6NL26 309 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 ANKRD30BLA7E2S9 258 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 CD300LBA8K4G0 201 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 A8MXE2 369 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 TMEM178BH3BS89 294 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 H7C417 338 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 M0QZ24 198 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 EEF1E1O43324 174 aaKnown RBP4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 LYRM1O43325 122 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 AKR7A2O43488 359 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 GMDSO60547 372 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 SMPD2O60906 423 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 CA11O75493 328 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 RBBP9O75884 186 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 LYZL6O75951 148 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 MELTFP08582 738 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 TBPP20226 339 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 CCNOP22674 350 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 CPT2P23786 658 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 ACKR3P25106 362 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 PRSS3P35030 304 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 FAUP35544 74 aaKnown RBP4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 WNT5AP41221 380 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 RAD52P43351 418 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 CBX5P45973 191 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 IDH3GP51553 393 aaPredicted RBP4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 RAG2P55895 527 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 MTCP1P56278 107 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 PPP1CBP62140 327 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 RPS23P62266 143 aaKnown RBP4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 MZT1Q08AG7 82 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 GK2Q14410 553 aaPredicted RBP4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 TAB1Q15750 504 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 PNLIPRP3Q17RR3 467 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 PLCXD3Q63HM9 321 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 ZNF57Q68EA5 555 aaPredicted RBP4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 GLIPR1L1Q6UWM5 242 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 CCBE1Q6UXH8 406 aaPredicted RBP4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 GDPD3Q7L5L3 318 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 ANGPTL5Q86XS5 388 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 ZNF101Q8IZC7 436 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 TOMM5Q8N4H5 51 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 FAM89BQ8N5H3 189 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 WDR31Q8NA23 367 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 SPERTQ8NA61 448 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 ST6GALNAC3Q8NDV1 305 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 DUSP18Q8NEJ0 188 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 OR56B2PQ8NGI1 322 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 OR56B1Q8NGI3 324 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 OR5A2Q8NGI9 324 aa4.05□□□□□ -1.76
DEPDC1B-203ENST00000505017 OR2AE1Q8NHA4 323 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms