RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 PATZ1Q9HBE1 687 aaKnown RBP6.59□□□□□ -1.35
NEDD9-208ENST00000504387 IL36RNQ9UBH0 155 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 MMP17Q9ULZ9 603 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 TP53TG5Q9Y2B4 290 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 RBM7Q9Y580 266 aaKnown RBP6.59□□□□□ -1.35
NEDD9-208ENST00000504387 ZNF318Q5VUA4 2279 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 GVINP1Q7Z2Y8 2422 aa6.59□□□□□ -1.35
NEDD9-208ENST00000504387 A0A1W2PPC4 97 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 LRRC3CA6NJW4 275 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 C2CD4DB7Z1M9 353 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 BCAT2O15382 392 aaPredicted RBP6.59□□□□□ -1.36
NEDD9-208ENST00000504387 TSPAN2O60636 221 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 SCTP09683 121 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 S100A7P31151 101 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 GALR1P47211 349 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 NPBWR2P48146 333 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 DCAF7P61962 342 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 SPANXN5Q5MJ07 72 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 ETFRF1Q6IPR1 90 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 TOMM20LQ6UXN7 152 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 TMEM183AQ8IXX5 376 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 MAML2Q8IZL2 1156 aaPredicted RBP6.59□□□□□ -1.36
NEDD9-208ENST00000504387 SCGB1C1Q8TD33 95 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 TMEM234Q8WY98 164 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 DOCK10Q96BY6 2186 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 DIRC2Q96SL1 478 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 FAM103A1Q9BTL3 118 aaKnown RBP6.59□□□□□ -1.36
NEDD9-208ENST00000504387 TMEM208Q9BTX3 173 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 PLEKHF2Q9H8W4 249 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 UCK1Q9HA47 277 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 CCL28Q9NRJ3 127 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 CLEC1BQ9P126 229 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 HS3ST3A1Q9Y663 406 aa6.59□□□□□ -1.36
NEDD9-208ENST00000504387 DMDP11532 3685 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 FER1L5A0AVI2 2057 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 IGKV1-27A0A075B6S5 117 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 CEACAM18A8MTB9 384 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 H7BYZ3 331 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 M0R143 59 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 MPPED1O15442 326 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 IFNA5P01569 189 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 FGF5P12034 268 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 MRPS21P82921 87 aaKnown RBP6.58□□□□□ -1.36
NEDD9-208ENST00000504387 IL13RA2Q14627 380 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 PRR31Q5SQ13 230 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 PHYHD1Q5SRE7 291 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 ZNF468Q5VIY5 522 aaPredicted RBP6.58□□□□□ -1.36
NEDD9-208ENST00000504387 ZDHHC23Q8IYP9 409 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 FAM131CQ96AQ9 280 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 OR5B12Q96R08 314 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 UCN2Q96RP3 112 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 TBX15Q96SF7 602 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 ARV1Q9H2C2 271 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 ZNF286AQ9HBT8 521 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 B3GAT1Q9P2W7 334 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 TMED3Q9Y3Q3 217 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 IGKV1D-13A0A0B4J2D9 117 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 A0A0G2JRQ6 117 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 GDF9O60383 454 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 IGKV1-13P0DP09 117 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 CCL2P13500 99 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 IRF2P14316 349 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 GNG10P50151 68 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 RPP30P78346 268 aaKnown RBP6.58□□□□□ -1.36
NEDD9-208ENST00000504387 FOXO1Q12778 655 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 CRIP3Q6Q6R5 217 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 DEGS2Q6QHC5 323 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 ZNF818PQ6ZRF7 136 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 OR4F5Q8NH21 305 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 LHX4Q969G2 390 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 DDIT4LQ96D03 193 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 BORCS8Q96FH0 119 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 ZNF385AQ96PM9 386 aaKnown RBP6.58□□□□□ -1.36
NEDD9-208ENST00000504387 HS3ST6Q96QI5 342 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 OR4F4Q96R69 305 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 METTL9Q9H1A3 318 aa6.58□□□□□ -1.36
NEDD9-208ENST00000504387 A0A1B0GU03 582 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 LIPT2A6NK58 231 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 M0R135 149 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 DVL1O14640 695 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 CA11O75493 328 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 PPYP01298 95 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 IGKV3-11P04433 115 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 CST2P09228 141 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 UCP2P55851 309 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 RNF151Q2KHN1 245 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 COL13A1Q5TAT6 717 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-208ENST00000504387 FAM78BQ5VT40 261 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 RAET1LQ5VY80 246 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 OR10G3Q8NGC4 313 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 OR13D1Q8NGV5 346 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 RHBDD1Q8TEB9 315 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 RBMXL1Q96E39 390 aaKnown RBP6.57□□□□□ -1.36
NEDD9-208ENST00000504387 ZNF799Q96GE5 643 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 C18orf12Q96KH6 178 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 OR6C1Q96RD1 312 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 IMMP2LQ96T52 175 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 OPN3Q9H1Y3 402 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-208ENST00000504387 Q9N2K0 584 aa6.57□□□□□ -1.36
NEDD9-208ENST00000504387 FKBP11Q9NYL4 201 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms