RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 SSBP1Q04837 148 aaKnown RBP13.12□□□□□ -0.31
CTDSP1-214ENST00000497677 OXA1LQ15070 435 aa13.12□□□□□ -0.31
CTDSP1-214ENST00000497677 METTL11BQ5VVY1 283 aa13.12□□□□□ -0.31
CTDSP1-214ENST00000497677 RUSC1-AS1Q66K80 236 aa13.12□□□□□ -0.31
CTDSP1-214ENST00000497677 MZT2BQ6NZ67 158 aa13.12□□□□□ -0.31
CTDSP1-214ENST00000497677 ASCL4Q6XD76 172 aa13.12□□□□□ -0.31
CTDSP1-214ENST00000497677 SLC25A26Q70HW3 274 aa13.12□□□□□ -0.31
CTDSP1-214ENST00000497677 SAXO1Q8IYX7 474 aa13.12□□□□□ -0.31
CTDSP1-214ENST00000497677 KIR3DL3Q8N743 410 aa13.12□□□□□ -0.31
CTDSP1-214ENST00000497677 FCAMRQ8WWV6 532 aa13.12□□□□□ -0.31
CTDSP1-214ENST00000497677 MRPS24Q96EL2 167 aaKnown RBP13.12□□□□□ -0.31
CTDSP1-214ENST00000497677 METTL9Q9H1A3 318 aa13.12□□□□□ -0.31
CTDSP1-214ENST00000497677 IL36GQ9NZH8 169 aa13.12□□□□□ -0.31
CTDSP1-214ENST00000497677 TRIM77I1YAP6 450 aa13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 KDM4BO94953 1096 aa13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 KNG1P01042 644 aa13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 VSIG8P0DPA2 414 aa13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 NDUFB7P17568 137 aa13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 OR3A4PP47883 348 aa13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 ZP1P60852 638 aa13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 PDCD1Q15116 288 aa13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 DEFB112Q30KQ8 113 aa13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 GPR157Q5UAW9 335 aa13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 C1orf122Q6ZSJ8 110 aa13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 ZNF561Q8N587 486 aa13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 TMEM185AQ8NFB2 350 aa13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 H1FXQ92522 213 aaKnown RBP13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 TNFRSF14Q92956 283 aa13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 SLAMF9Q96A28 289 aa13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 C7orf50Q9BRJ6 194 aaKnown RBP13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 TMEM59Q9BXS4 323 aa13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 SCPEP1Q9HB40 452 aa13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 TAS2R8Q9NYW2 309 aa13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 ING4Q9UNL4 249 aa13.11□□□□□ -0.31
CTDSP1-214ENST00000497677 IGHV1-69DA0A0B4J2H0 117 aa13.1□□□□□ -0.31
CTDSP1-214ENST00000497677 MDFIC2A0A1B0GVS7 189 aa13.1□□□□□ -0.31
CTDSP1-214ENST00000497677 CENPXA8MT69 81 aa13.1□□□□□ -0.31
CTDSP1-214ENST00000497677 H3BUI4 141 aa13.1□□□□□ -0.31
CTDSP1-214ENST00000497677 CYB5AP00167 134 aa13.1□□□□□ -0.31
CTDSP1-214ENST00000497677 IGHV1-69P01742 117 aa13.1□□□□□ -0.31
CTDSP1-214ENST00000497677 TMEM225BP0DP42 221 aa13.1□□□□□ -0.31
CTDSP1-214ENST00000497677 PRTN3P24158 256 aa13.1□□□□□ -0.31
CTDSP1-214ENST00000497677 NPBWR2P48146 333 aa13.1□□□□□ -0.31
CTDSP1-214ENST00000497677 PDZK1IP1Q13113 114 aa13.1□□□□□ -0.31
CTDSP1-214ENST00000497677 RBMS3Q6XE24 437 aaKnown RBP13.1□□□□□ -0.31
CTDSP1-214ENST00000497677 VMO1Q7Z5L0 202 aa13.1□□□□□ -0.31
CTDSP1-214ENST00000497677 CENPSQ8N2Z9 138 aa13.1□□□□□ -0.31
CTDSP1-214ENST00000497677 OR56B1Q8NGI3 324 aa13.1□□□□□ -0.31
CTDSP1-214ENST00000497677 LHX4Q969G2 390 aa13.1□□□□□ -0.31
CTDSP1-214ENST00000497677 SPACA5Q96QH8 159 aa13.1□□□□□ -0.31
CTDSP1-214ENST00000497677 SEBOXQ9HB31 216 aaPredicted RBP13.1□□□□□ -0.31
CTDSP1-214ENST00000497677 RHOFQ9HBH0 211 aa13.1□□□□□ -0.31
CTDSP1-214ENST00000497677 ONECUT1Q9UBC0 465 aa13.1□□□□□ -0.31
CTDSP1-214ENST00000497677 TRBV23-1A0A0A0MS06 115 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 IGKV1-12A0A0C4DH73 117 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 DNAJC9-AS1A6NH13 148 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 CLDN34H7C241 214 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 ZNF737O75373 536 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 CRTAPO75718 401 aaPredicted RBP13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 IGKV1D-12P01611 117 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 CSTBP04080 98 aaKnown RBP13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 GTF2F2P13984 249 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 EFNB2P52799 333 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 DLX1P56177 255 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 BAMBIQ13145 260 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 UNC119Q13432 240 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 DYRK1AQ13627 763 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 RSU1Q15404 277 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 SLC9A3R2Q15599 337 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 Q6ZNX1 250 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 SNX29P2Q8IUI4 249 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 MKXQ8IYA7 352 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 PIP4P2Q8N4L2 257 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 TRIM63Q969Q1 353 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 DUX5Q96PT3 197 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 TM2D1Q9BX74 207 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 UNKLQ9H9P5 680 aaKnown RBP13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 SIRT7Q9NRC8 400 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 C19orf12Q9NSK7 152 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 RBFOX1Q9NWB1 397 aaKnown RBP13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 IL36RNQ9UBH0 155 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 OR14J1Q9UGF5 321 aa13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 ZNF107Q9UII5 783 aaPredicted RBP13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 RBMX2Q9Y388 322 aaKnown RBP13.09□□□□□ -0.31
CTDSP1-214ENST00000497677 TRAV18A0A075B6X5 111 aa13.08□□□□□ -0.32
CTDSP1-214ENST00000497677 TMEM89A2RUT3 159 aa13.08□□□□□ -0.32
CTDSP1-214ENST00000497677 RNASEK-C17orf49H0YIS7 233 aa13.08□□□□□ -0.32
CTDSP1-214ENST00000497677 K7N7A8 449 aa13.08□□□□□ -0.32
CTDSP1-214ENST00000497677 M0R1W7 72 aa13.08□□□□□ -0.32
CTDSP1-214ENST00000497677 SPRY1O43609 319 aaPredicted RBP13.08□□□□□ -0.32
CTDSP1-214ENST00000497677 MPIG6BO95866 241 aa13.08□□□□□ -0.32
CTDSP1-214ENST00000497677 TK1P04183 234 aa13.08□□□□□ -0.32
CTDSP1-214ENST00000497677 GSTP1P09211 210 aaKnown RBP13.08□□□□□ -0.32
CTDSP1-214ENST00000497677 BCL3P20749 454 aa13.08□□□□□ -0.32
CTDSP1-214ENST00000497677 PRSS3P35030 304 aa13.08□□□□□ -0.32
CTDSP1-214ENST00000497677 RPS27AP62979 156 aaKnown RBP13.08□□□□□ -0.32
CTDSP1-214ENST00000497677 COL10A1Q03692 680 aa13.08□□□□□ -0.32
CTDSP1-214ENST00000497677 PRB3Q04118 309 aaPredicted RBP13.08□□□□□ -0.32
CTDSP1-214ENST00000497677 SLC22A6Q4U2R8 563 aa13.08□□□□□ -0.32
CTDSP1-214ENST00000497677 ZNF57Q68EA5 555 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms