RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 PITPNAQ00169 270 aa11.28□□□□□ -0.6
CDK9-204ENST00000491521 PAN3Q58A45 887 aaKnown RBP11.28□□□□□ -0.6
CDK9-204ENST00000491521 STUMQ69YW2 141 aa11.28□□□□□ -0.6
CDK9-204ENST00000491521 SNX29P2Q8IUI4 249 aa11.28□□□□□ -0.6
CDK9-204ENST00000491521 ZDHHC22Q8N966 263 aa11.28□□□□□ -0.6
CDK9-204ENST00000491521 SUMF2Q8NBJ7 301 aa11.28□□□□□ -0.6
CDK9-204ENST00000491521 MED30Q96HR3 178 aa11.28□□□□□ -0.6
CDK9-204ENST00000491521 FAAP24Q9BTP7 215 aa11.28□□□□□ -0.6
CDK9-204ENST00000491521 DPCDQ9BVM2 203 aaPredicted RBP11.28□□□□□ -0.6
CDK9-204ENST00000491521 PECRQ9BY49 303 aa11.28□□□□□ -0.6
CDK9-204ENST00000491521 MS4A7Q9GZW8 240 aaPredicted RBP11.28□□□□□ -0.6
CDK9-204ENST00000491521 ING3Q9NXR8 418 aa11.28□□□□□ -0.6
CDK9-204ENST00000491521 SOX21Q9Y651 276 aaPredicted RBP11.28□□□□□ -0.6
CDK9-204ENST00000491521 TRAV24A0A0B4J272 114 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 TRAV40A0A0B4J280 105 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 SLC33A1O00400 549 aaPredicted RBP11.27□□□□□ -0.61
CDK9-204ENST00000491521 CHATP28329 748 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 UBA52P62987 128 aaKnown RBP11.27□□□□□ -0.61
CDK9-204ENST00000491521 IL13RA1P78552 427 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 MRPS15P82914 257 aaKnown RBP11.27□□□□□ -0.61
CDK9-204ENST00000491521 PAX8Q06710 450 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 BAMBIQ13145 260 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 ARFRP1Q13795 201 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 RBM39Q14498 530 aaKnown RBP11.27□□□□□ -0.61
CDK9-204ENST00000491521 ARL6IP1Q15041 203 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 PYDC2Q56P42 97 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 PLAC9Q5JTB6 97 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 SIGIRRQ6IA17 410 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 BAIAP2L2Q6UXY1 529 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 DCDC5Q6ZRR9 648 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 LINC00299Q6ZSB3 139 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 SLC36A1Q7Z2H8 476 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 CCDC190Q86UF4 302 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 ZNF561Q8N587 486 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 C3orf56Q8N813 242 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 TMEM185AQ8NFB2 350 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 PPP1R35Q8TAP8 253 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 S100ZQ8WXG8 99 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 TSC22D3Q99576 134 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 NUDT16L1Q9BRJ7 211 aaKnown RBP11.27□□□□□ -0.61
CDK9-204ENST00000491521 CHST6Q9GZX3 395 aa11.27□□□□□ -0.61
CDK9-204ENST00000491521 SEBOXQ9HB31 216 aaPredicted RBP11.27□□□□□ -0.61
CDK9-204ENST00000491521 DNAJC9-AS1A6NH13 148 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 NDUFB3O43676 98 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 FSTL3O95633 263 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 HIST1H1DP16402 221 aaKnown RBP11.26□□□□□ -0.61
CDK9-204ENST00000491521 LMO1P25800 156 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 PAX2Q02962 417 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 LSAMPQ13449 338 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 GRK1Q15835 563 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 ZNF260Q3ZCT1 412 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 ATPAF1Q5TC12 328 aaPredicted RBP11.26□□□□□ -0.61
CDK9-204ENST00000491521 WDR25Q64LD2 544 aaPredicted RBP11.26□□□□□ -0.61
CDK9-204ENST00000491521 PYHIN1Q6K0P9 492 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 ZNF788Q6ZQV5 615 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 RTN4RL2Q86UN3 420 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 FAM216BQ8N7L0 139 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 ZNRF1Q8ND25 227 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 C15orf40Q8WUR7 153 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 SDSLQ96GA7 329 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 SNX22Q96L94 193 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 ZNF48Q96MX3 618 aaPredicted RBP11.26□□□□□ -0.61
CDK9-204ENST00000491521 GAFA1Q96PS6 74 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 SULT4A1Q9BR01 284 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 DNTTIP1Q9H147 329 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 PPA2Q9H2U2 334 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 AUNIPQ9H7T9 357 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 IFT22Q9H7X7 185 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 ETAA1Q9NY74 926 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 RABL2AQ9UBK7 228 aaPredicted RBP11.26□□□□□ -0.61
CDK9-204ENST00000491521 ZNF222Q9UK12 451 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 HSF4Q9ULV5 492 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 RABL2BQ9UNT1 228 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 MAB21L2Q9Y586 359 aa11.26□□□□□ -0.61
CDK9-204ENST00000491521 MDFIC2A0A1B0GVS7 189 aa11.25□□□□□ -0.61
CDK9-204ENST00000491521 TMEM82A0PJX8 343 aa11.25□□□□□ -0.61
CDK9-204ENST00000491521 FOXI3A8MTJ6 420 aaPredicted RBP11.25□□□□□ -0.61
CDK9-204ENST00000491521 C22orf46C9J442 243 aa11.25□□□□□ -0.61
CDK9-204ENST00000491521 PSPNO60542 156 aa11.25□□□□□ -0.61
CDK9-204ENST00000491521 HLA-DQB1P01920 261 aa11.25□□□□□ -0.61
CDK9-204ENST00000491521 GLAP06280 429 aa11.25□□□□□ -0.61
CDK9-204ENST00000491521 GSTP1P09211 210 aaKnown RBP11.25□□□□□ -0.61
CDK9-204ENST00000491521 CD3GP09693 182 aa11.25□□□□□ -0.61
CDK9-204ENST00000491521 PTHLHP12272 177 aa11.25□□□□□ -0.61
CDK9-204ENST00000491521 NDUFB7P17568 137 aa11.25□□□□□ -0.61
CDK9-204ENST00000491521 AMY2BP19961 511 aa11.25□□□□□ -0.61
CDK9-204ENST00000491521 PRSS3P35030 304 aa11.25□□□□□ -0.61
CDK9-204ENST00000491521 GNG2P59768 71 aa11.25□□□□□ -0.61
CDK9-204ENST00000491521 ZNF45Q02386 682 aa11.25□□□□□ -0.61
CDK9-204ENST00000491521 RNASE12Q5GAN4 147 aaKnown RBP11.25□□□□□ -0.61
CDK9-204ENST00000491521 OLFML2AQ68BL7 652 aa11.25□□□□□ -0.61
CDK9-204ENST00000491521 OR4S1Q8NGB4 309 aa11.25□□□□□ -0.61
CDK9-204ENST00000491521 OR5D13Q8NGL4 314 aa11.25□□□□□ -0.61
CDK9-204ENST00000491521 PCGF1Q9BSM1 259 aa11.25□□□□□ -0.61
CDK9-204ENST00000491521 CHMP1AQ9HD42 196 aaPredicted RBP11.25□□□□□ -0.61
CDK9-204ENST00000491521 RCC2Q9P258 522 aaKnown RBP11.25□□□□□ -0.61
CDK9-204ENST00000491521 CTSZQ9UBR2 303 aa11.25□□□□□ -0.61
CDK9-204ENST00000491521 AK3Q9UIJ7 227 aa11.25□□□□□ -0.61
CDK9-204ENST00000491521 ELF5Q9UKW6 265 aaPredicted RBP11.25□□□□□ -0.61
CDK9-204ENST00000491521 KIR2DS1A0A191URI9 304 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms