RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 RPS11P62280 158 aaKnown RBP eCLIP15.28■□□□□ 0.04
CLIP2-206ENST00000487091 Q499Y3 187 aa15.28■□□□□ 0.04
CLIP2-206ENST00000487091 HIST2H2BDQ6DRA6 164 aa15.28■□□□□ 0.04
CLIP2-206ENST00000487091 OR10A7Q8NGE5 316 aa15.28■□□□□ 0.04
CLIP2-206ENST00000487091 OR13C5Q8NGS8 318 aa15.28■□□□□ 0.04
CLIP2-206ENST00000487091 PLPPR1Q8TBJ4 325 aa15.28■□□□□ 0.04
CLIP2-206ENST00000487091 CAPSLQ8WWF8 208 aa15.28■□□□□ 0.04
CLIP2-206ENST00000487091 PGLYRP3Q96LB9 341 aa15.28■□□□□ 0.04
CLIP2-206ENST00000487091 OCSTAMPQ9BR26 566 aa15.28■□□□□ 0.04
CLIP2-206ENST00000487091 DPCDQ9BVM2 203 aaPredicted RBP15.28■□□□□ 0.04
CLIP2-206ENST00000487091 MMP28Q9H239 520 aa15.28■□□□□ 0.04
CLIP2-206ENST00000487091 PLXNB1O43157 2135 aa15.28■□□□□ 0.04
CLIP2-206ENST00000487091 OR7C1O76099 320 aaPredicted RBP15.27■□□□□ 0.04
CLIP2-206ENST00000487091 CD24P25063 80 aa15.27■□□□□ 0.04
CLIP2-206ENST00000487091 MNDAP41218 407 aa15.27■□□□□ 0.04
CLIP2-206ENST00000487091 TAS2R43P59537 309 aa15.27■□□□□ 0.04
CLIP2-206ENST00000487091 MPV17LQ2QL34 196 aa15.27■□□□□ 0.04
CLIP2-206ENST00000487091 UTF1Q5T230 341 aa15.27■□□□□ 0.04
CLIP2-206ENST00000487091 OGFRL1Q5TC84 451 aaPredicted RBP15.27■□□□□ 0.04
CLIP2-206ENST00000487091 SLC16A12Q6ZSM3 486 aa15.27■□□□□ 0.04
CLIP2-206ENST00000487091 NDUFA11Q86Y39 141 aa15.27■□□□□ 0.04
CLIP2-206ENST00000487091 C8orf59Q8N0T1 100 aaPredicted RBP15.27■□□□□ 0.04
CLIP2-206ENST00000487091 SUMF2Q8NBJ7 301 aa15.27■□□□□ 0.04
CLIP2-206ENST00000487091 RBM14Q96PK6 669 aaKnown RBP15.27■□□□□ 0.04
CLIP2-206ENST00000487091 ZNF184Q99676 751 aaPredicted RBP15.27■□□□□ 0.04
CLIP2-206ENST00000487091 PLCXD1Q9NUJ7 323 aa15.27■□□□□ 0.04
CLIP2-206ENST00000487091 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.27■□□□□ 0.04
CLIP2-206ENST00000487091 CKLFQ9UBR5 152 aa15.27■□□□□ 0.04
CLIP2-206ENST00000487091 AMMECR1Q9Y4X0 333 aaPredicted RBP15.27■□□□□ 0.04
CLIP2-206ENST00000487091 J3QR06 171 aa15.26■□□□□ 0.03
CLIP2-206ENST00000487091 CASQ2O14958 399 aaPredicted RBP15.26■□□□□ 0.03
CLIP2-206ENST00000487091 OR2F2O95006 317 aa15.26■□□□□ 0.03
CLIP2-206ENST00000487091 FSTP19883 344 aa15.26■□□□□ 0.03
CLIP2-206ENST00000487091 GZMHP20718 246 aa15.26■□□□□ 0.03
CLIP2-206ENST00000487091 GPR176Q14439 515 aa15.26■□□□□ 0.03
CLIP2-206ENST00000487091 RBM39Q14498 530 aaKnown RBP15.26■□□□□ 0.03
CLIP2-206ENST00000487091 LAIR2Q6ISS4 152 aa15.26■□□□□ 0.03
CLIP2-206ENST00000487091 ZFP41Q8N8Y5 198 aa15.26■□□□□ 0.03
CLIP2-206ENST00000487091 MRGPRDQ8TDS7 321 aa15.26■□□□□ 0.03
CLIP2-206ENST00000487091 FBLIM1Q8WUP2 373 aa15.26■□□□□ 0.03
CLIP2-206ENST00000487091 ORAI1Q96D31 301 aa15.26■□□□□ 0.03
CLIP2-206ENST00000487091 OR5M11Q96RB7 305 aa15.26■□□□□ 0.03
CLIP2-206ENST00000487091 SLC25A33Q9BSK2 321 aa15.26■□□□□ 0.03
CLIP2-206ENST00000487091 PSORS1C1Q9UIG5 152 aa15.26■□□□□ 0.03
CLIP2-206ENST00000487091 TRBV5-7A0A0A0MS05 114 aa15.25■□□□□ 0.03
CLIP2-206ENST00000487091 GEMIN2O14893 280 aaKnown RBP15.25■□□□□ 0.03
CLIP2-206ENST00000487091 CD1AP06126 327 aa15.25■□□□□ 0.03
CLIP2-206ENST00000487091 GNAO1P09471 354 aa15.25■□□□□ 0.03
CLIP2-206ENST00000487091 GTF2F2P13984 249 aa15.25■□□□□ 0.03
CLIP2-206ENST00000487091 SERPINA2P20848 420 aa15.25■□□□□ 0.03
CLIP2-206ENST00000487091 NSUN5P1Q3KNT7 163 aa15.25■□□□□ 0.03
CLIP2-206ENST00000487091 THNSL2Q86YJ6 484 aa15.25■□□□□ 0.03
CLIP2-206ENST00000487091 C1QL4Q86Z23 238 aa15.25■□□□□ 0.03
CLIP2-206ENST00000487091 CDH26Q8IXH8 852 aa15.25■□□□□ 0.03
CLIP2-206ENST00000487091 RPEQ96AT9 228 aa15.25■□□□□ 0.03
CLIP2-206ENST00000487091 CITED2Q99967 270 aaPredicted RBP15.25■□□□□ 0.03
CLIP2-206ENST00000487091 ZNF581Q9P0T4 197 aa15.25■□□□□ 0.03
CLIP2-206ENST00000487091 PSG11Q9UQ72 335 aa15.25■□□□□ 0.03
CLIP2-206ENST00000487091 TGP01266 2768 aa15.25■□□□□ 0.03
CLIP2-206ENST00000487091 TRAV8-7A0A075B6U6 113 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 FAM90A18PA6NE21 464 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 FAM90A16PA6NEW6 464 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 FAM90A20PA6NIJ5 464 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 FAM90A9PA6NNJ1 464 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 FAM90A12PA8MX19 464 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 FAM90A5PA8MXJ8 464 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 M0QZK8 103 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 XPNPEP2O43895 674 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 FAM90A15PP0C7V4 464 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 FAM90A13PP0C7W8 464 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 FAM90A14PP0C7W9 464 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 FAM90A24PP0C7X0 464 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 FAM106CPP0CH98 169 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 MADCAM1Q13477 382 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 TMEM95Q3KNT9 176 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 SLC22A6Q4U2R8 563 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 LYG1Q8N1E2 194 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 STX19Q8N4C7 294 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 OR4F17Q8NGA8 305 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 RFESDQ8TAC1 157 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 TOMM40LQ969M1 308 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 OR4F4Q96R69 305 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 NOTCH3Q9UM47 2321 aa15.24■□□□□ 0.03
CLIP2-206ENST00000487091 TMEM30CPA0ZSE6 113 aa15.23■□□□□ 0.03
CLIP2-206ENST00000487091 MAGEA13PA6NCF6 341 aa15.23■□□□□ 0.03
CLIP2-206ENST00000487091 ADARB2-AS1A8MUL3 147 aa15.23■□□□□ 0.03
CLIP2-206ENST00000487091 SSTR5P35346 364 aa15.23■□□□□ 0.03
CLIP2-206ENST00000487091 WNT4P56705 351 aa15.23■□□□□ 0.03
CLIP2-206ENST00000487091 ABCA11PQ4W5N1 156 aa15.23■□□□□ 0.03
CLIP2-206ENST00000487091 OR5AU1Q8NGC0 362 aa15.23■□□□□ 0.03
CLIP2-206ENST00000487091 LEAP2Q969E1 77 aa15.23■□□□□ 0.03
CLIP2-206ENST00000487091 MRPS24Q96EL2 167 aaKnown RBP15.23■□□□□ 0.03
CLIP2-206ENST00000487091 OR14A2Q96R54 314 aa15.23■□□□□ 0.03
CLIP2-206ENST00000487091 SPACA1Q9HBV2 294 aa15.23■□□□□ 0.03
CLIP2-206ENST00000487091 TRAV39A0A0B4J263 110 aa15.22■□□□□ 0.03
CLIP2-206ENST00000487091 A0A1W2PP11 408 aa15.22■□□□□ 0.03
CLIP2-206ENST00000487091 MYL12BO14950 172 aa15.22■□□□□ 0.03
CLIP2-206ENST00000487091 IGHV3-7P01780 117 aa15.22■□□□□ 0.03
CLIP2-206ENST00000487091 AMY1AP04745 511 aa15.22■□□□□ 0.03
CLIP2-206ENST00000487091 AMY2AP04746 511 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms