RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 PAN3Q58A45 887 aaKnown RBP12.29□□□□□ -0.44
POLR2J3-204ENST00000486319 ZNF660Q6AZW8 331 aaPredicted RBP12.29□□□□□ -0.44
POLR2J3-204ENST00000486319 ZNF826PQ6ZT77 177 aa12.29□□□□□ -0.44
POLR2J3-204ENST00000486319 LYG2Q86SG7 212 aa12.29□□□□□ -0.44
POLR2J3-204ENST00000486319 HYLS1Q96M11 299 aa12.29□□□□□ -0.44
POLR2J3-204ENST00000486319 WDR13Q9H1Z4 485 aa12.29□□□□□ -0.44
POLR2J3-204ENST00000486319 ESRP2Q9H6T0 727 aaKnown RBP12.29□□□□□ -0.44
POLR2J3-204ENST00000486319 RANBP3Q9H6Z4 567 aaPredicted RBP12.29□□□□□ -0.44
POLR2J3-204ENST00000486319 UFSP2Q9NUQ7 469 aa12.29□□□□□ -0.44
POLR2J3-204ENST00000486319 C1orf123Q9NWV4 160 aa12.29□□□□□ -0.44
POLR2J3-204ENST00000486319 RASL12Q9NYN1 266 aa12.29□□□□□ -0.44
POLR2J3-204ENST00000486319 ZDHHC8Q9ULC8 765 aa12.29□□□□□ -0.44
POLR2J3-204ENST00000486319 ANKRD17O75179 2603 aaKnown RBP12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 hCG_1807616A0A1W2PRN6 198 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 C9orf170A2RU37 121 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 SLC33A1O00400 549 aaPredicted RBP12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 FABP7O15540 132 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 HAND1O96004 215 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 KNG1P01042 644 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 CTXN2P0C2S0 81 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 GSTT2P0CG29 244 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 AKR1C4P17516 323 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 CFHR2P36980 270 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 ZNF81P51508 661 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 IL13RA1P78552 427 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 DHODHQ02127 395 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 PPP1R1AQ13522 171 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 KCNJ8Q15842 424 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 SMIM21Q3B7S5 101 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 TMEM128Q5BJH2 165 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 ACP7Q6ZNF0 438 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 UXS1Q8NBZ7 420 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 ASB13Q8WXK3 278 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 ZNF486Q96H40 463 aaPredicted RBP12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 C5orf66Q9H5L9 145 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 UBTD1Q9HAC8 227 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 DECR2Q9NUI1 292 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 C14orf166Q9Y224 244 aaKnown RBP12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 ATP23Q9Y6H3 246 aa12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 HRNRQ86YZ3 2850 aaPredicted RBP12.28□□□□□ -0.44
POLR2J3-204ENST00000486319 TRDCB7Z8K6 153 aa12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 SIRPB1O00241 398 aa12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 GIPP09681 153 aaPredicted RBP12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 PGAM2P15259 253 aa12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 TNFSF4P23510 183 aa12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 LMO1P25800 156 aa12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 CD34P28906 385 aa12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 Q6ZPA2 131 aa12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 NLRC3Q7RTR2 1065 aa12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 ADAD2Q8NCV1 583 aaKnown RBP12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 MRPL30Q8TCC3 161 aaKnown RBP12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 ZFAND1Q8TCF1 268 aa12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 LRRC29Q8WV35 223 aa12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 MEGF10Q96KG7 1140 aa12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 OR2V2Q96R30 315 aa12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 DIRC2Q96SL1 478 aa12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 PHB2Q99623 299 aa12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 TMEM165Q9HC07 324 aa12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 DLL4Q9NR61 685 aa12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 IL19Q9UHD0 177 aa12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 MGAT4AQ9UM21 535 aa12.27□□□□□ -0.44
POLR2J3-204ENST00000486319 IFNL4K9M1U5 179 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 SPRY3O43610 288 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 SLC22A5O76082 557 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 OR2A4O95047 310 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 PLAUP00749 431 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 CTSDP07339 412 aaPredicted RBP12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 CD3EP07766 207 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 FCGR2CP31995 323 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 GATA4P43694 442 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 GMFBP60983 142 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 RAP2BP61225 183 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 TESK1Q15569 626 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 NCMAPQ5T1S8 102 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 ZNF880Q6PDB4 577 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 C11orf88Q6PI97 169 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 MOB1BQ7L9L4 216 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 FAM90A1Q86YD7 464 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 MITD1Q8WV92 249 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 MBD6Q96DN6 1003 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 OR2A7Q96R45 310 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 FOXC2Q99958 501 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 RTBDNQ9BSG5 229 aaPredicted RBP12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 TMEM204Q9BSN7 226 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 OR14J1Q9UGF5 321 aa12.27□□□□□ -0.45
POLR2J3-204ENST00000486319 PLCE1Q9P212 2302 aa12.26□□□□□ -0.45
POLR2J3-204ENST00000486319 AKAP9Q99996 3911 aa12.26□□□□□ -0.45
POLR2J3-204ENST00000486319 SRRM5B3KS81 715 aa12.26□□□□□ -0.45
POLR2J3-204ENST00000486319 C3orf80F5H4A9 247 aa12.26□□□□□ -0.45
POLR2J3-204ENST00000486319 SMLR1H3BR10 107 aa12.26□□□□□ -0.45
POLR2J3-204ENST00000486319 GOSR2O14653 212 aa12.26□□□□□ -0.45
POLR2J3-204ENST00000486319 WNT9BO14905 357 aa12.26□□□□□ -0.45
POLR2J3-204ENST00000486319 DUS4LO95620 317 aaKnown RBP12.26□□□□□ -0.45
POLR2J3-204ENST00000486319 VAMP1P23763 118 aa12.26□□□□□ -0.45
POLR2J3-204ENST00000486319 KCNJ3P48549 501 aa12.26□□□□□ -0.45
POLR2J3-204ENST00000486319 LPCAT3Q6P1A2 487 aa12.26□□□□□ -0.45
POLR2J3-204ENST00000486319 LURAP1LQ8IV03 231 aa12.26□□□□□ -0.45
POLR2J3-204ENST00000486319 GAPTQ8N292 157 aa12.26□□□□□ -0.45
POLR2J3-204ENST00000486319 ERGIC1Q969X5 290 aa12.26□□□□□ -0.45
POLR2J3-204ENST00000486319 TMEM230Q96A57 120 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms