RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 COLCA1Q6ZS62 124 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 ASB5Q8WWX0 329 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 CACNG8Q8WXS5 425 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 DDIT4LQ96D03 193 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 AMELYQ99218 206 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 P2RX4Q99571 388 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 C19orf53Q9UNZ5 99 aaPredicted RBP6.78□□□□□ -1.32
COL4A5-205ENST00000483338 ARHGAP21Q5T5U3 1957 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 KIAA1549Q9HCM3 1950 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 IGSF23A1L1A6 192 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 TLX3O43711 291 aaPredicted RBP6.78□□□□□ -1.32
COL4A5-205ENST00000483338 LDB3O75112 727 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 NDUFB2O95178 105 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 GPX1P07203 203 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 C8orf89P0DMQ9 161 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 S100GP29377 79 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 MFGE8Q08431 387 aaPredicted RBP6.78□□□□□ -1.32
COL4A5-205ENST00000483338 IL13RA2Q14627 380 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 SIGLECL1Q8N7X8 197 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 PLPPR1Q8TBJ4 325 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 NEUROG1Q92886 237 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 EMG1Q92979 244 aaKnown RBP6.78□□□□□ -1.32
COL4A5-205ENST00000483338 LMLNQ96KR4 655 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 SIGMAR1Q99720 223 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 THYN1Q9P016 225 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 ANAPC10Q9UM13 185 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 DHDHQ9UQ10 334 aa6.78□□□□□ -1.32
COL4A5-205ENST00000483338 ERI3O43414 337 aaKnown RBP6.77□□□□□ -1.32
COL4A5-205ENST00000483338 KBTBD11O94819 623 aa6.77□□□□□ -1.32
COL4A5-205ENST00000483338 HAND1O96004 215 aa6.77□□□□□ -1.32
COL4A5-205ENST00000483338 CXCL10P02778 98 aa6.77□□□□□ -1.32
COL4A5-205ENST00000483338 SFTPDP35247 375 aa6.77□□□□□ -1.32
COL4A5-205ENST00000483338 CCR2P41597 374 aa6.77□□□□□ -1.32
COL4A5-205ENST00000483338 TMEM177Q53S58 311 aa6.77□□□□□ -1.32
COL4A5-205ENST00000483338 PHYHD1Q5SRE7 291 aa6.77□□□□□ -1.32
COL4A5-205ENST00000483338 C1orf100Q5SVJ3 147 aa6.77□□□□□ -1.32
COL4A5-205ENST00000483338 NEGR1Q7Z3B1 354 aa6.77□□□□□ -1.32
COL4A5-205ENST00000483338 LYPD6Q86Y78 171 aa6.77□□□□□ -1.32
COL4A5-205ENST00000483338 SLC16A11Q8NCK7 471 aa6.77□□□□□ -1.32
COL4A5-205ENST00000483338 OR5H2Q8NGV7 314 aa6.77□□□□□ -1.32
COL4A5-205ENST00000483338 ANAPC16Q96DE5 110 aa6.77□□□□□ -1.32
COL4A5-205ENST00000483338 CNRIP1Q96F85 164 aaPredicted RBP6.77□□□□□ -1.32
COL4A5-205ENST00000483338 ZFYVE21Q9BQ24 234 aa6.77□□□□□ -1.32
COL4A5-205ENST00000483338 OR51B2Q9Y5P1 312 aa6.77□□□□□ -1.32
COL4A5-205ENST00000483338 HS3ST1O14792 307 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 PITX3O75364 302 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 CEBPDP49716 269 aaPredicted RBP6.77□□□□□ -1.33
COL4A5-205ENST00000483338 TMEM267Q0VDI3 215 aaPredicted RBP6.77□□□□□ -1.33
COL4A5-205ENST00000483338 MRPL2Q5T653 305 aaKnown RBP6.77□□□□□ -1.33
COL4A5-205ENST00000483338 ZNF787Q6DD87 383 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 KCNIP4Q6PIL6 250 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 DPY19L4Q7Z388 723 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 NUP43Q8NFH3 380 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 DOK4Q8TEW6 326 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 SPSB1Q96BD6 273 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 SLC25A44Q96H78 314 aaPredicted RBP6.77□□□□□ -1.33
COL4A5-205ENST00000483338 ZNF764Q96H86 408 aaPredicted RBP6.77□□□□□ -1.33
COL4A5-205ENST00000483338 LMF2Q9BU23 707 aaKnown RBP6.77□□□□□ -1.33
COL4A5-205ENST00000483338 PHF7Q9BWX1 381 aaPredicted RBP6.77□□□□□ -1.33
COL4A5-205ENST00000483338 MTHFD2LQ9H903 347 aaPredicted RBP6.77□□□□□ -1.33
COL4A5-205ENST00000483338 NRN1Q9NPD7 142 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 MPDZO75970 2070 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 MUC21A0A0G2JKD1 596 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 MUC21A0A140T8X8 626 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 CTSEP14091 401 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 CRISP2P16562 243 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 QRFPP83859 136 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 TLE1Q04724 770 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 CD226Q15762 336 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.77□□□□□ -1.33
COL4A5-205ENST00000483338 MUC21Q5SSG8 566 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 MFSD12Q6NUT3 480 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 UFSP1Q6NVU6 142 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 LCN15Q6UWW0 184 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 NPVFQ9HCQ7 196 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 MBNL1Q9NR56 388 aaKnown RBP6.77□□□□□ -1.33
COL4A5-205ENST00000483338 PLAGL1Q9UM63 463 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 XIRP2A4UGR9 3374 aa6.77□□□□□ -1.33
COL4A5-205ENST00000483338 DPRXA6NFQ7 191 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 HCRTR1O43613 425 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 ZNF253O75346 499 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 CELA3BP08861 270 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 OR10J4P0C629 311 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 HIST3H3Q16695 136 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 SP6Q3SY56 376 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 TRMT12Q53H54 448 aaKnown RBP6.76□□□□□ -1.33
COL4A5-205ENST00000483338 EIPR1Q53HC9 387 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 DCST2Q5T1A1 773 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 PLPP4Q5VZY2 271 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 OTPQ5XKR4 325 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 Q6ZVL8 140 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 LYZL2Q7Z4W2 148 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 BAGE3Q86Y29 109 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 BAGE2Q86Y30 109 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 OR2C3Q8N628 320 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 ZDHHC11Q9H8X9 412 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 WDR76Q9H967 626 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 PPP1R3CQ9UQK1 317 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 WASHC3Q9Y3C0 194 aa6.76□□□□□ -1.33
COL4A5-205ENST00000483338 DUXBA0A1W2PPF3 345 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms