RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 TIMM10BQ9Y5J6 103 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 PCNX1Q96RV3 2341 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 PATJQ8NI35 1801 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 C17orf112F2Z3M2 114 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 TCF21O43680 179 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 PGA3P0DJD8 388 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 CCL20P78556 96 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 SLC10A1Q14973 349 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 MYO7BQ6PIF6 2116 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 CXorf67Q86X51 503 aaPredicted RBP11.8□□□□□ -0.52
USP42-206ENST00000479544 MRGPRFQ96AM1 343 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 RTN4RQ9BZR6 473 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 HSBP1L1C9JCN9 74 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 MT-CO2P00403 227 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 SUMO1P63165 101 aaKnown RBP11.8□□□□□ -0.52
USP42-206ENST00000479544 LINC00696Q6ZRV3 163 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 OR1F12Q8NHA8 337 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 GPBAR1Q8TDU6 330 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 PINX1Q96BK5 328 aaKnown RBP11.8□□□□□ -0.52
USP42-206ENST00000479544 PIGBOS1A0A0B4J2F0 54 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 FAM166BA8MTA8 275 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 PRR33A8MZF0 331 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 BCAT2O15382 392 aaPredicted RBP11.8□□□□□ -0.52
USP42-206ENST00000479544 PAGE4O60829 102 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 OR8U8P0C7N1 319 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 DTYMKP23919 212 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 KIR2DL1P43626 348 aaPredicted RBP11.8□□□□□ -0.52
USP42-206ENST00000479544 SLC35B1P78383 322 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 PRR27Q6MZM9 219 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 CRIPAKQ8N1N5 446 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 POC1BQ8TC44 478 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 Q8WTZ3 238 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 PTX4Q96A99 478 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 SPSB1Q96BD6 273 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 SMIM8Q96KF7 97 aa11.8□□□□□ -0.52
USP42-206ENST00000479544 ZNF385AQ96PM9 386 aaKnown RBP11.8□□□□□ -0.52
USP42-206ENST00000479544 DEFB108AA8MXU0 73 aa11.79□□□□□ -0.52
USP42-206ENST00000479544 FGF16O43320 207 aa11.79□□□□□ -0.52
USP42-206ENST00000479544 ZNF17P17021 662 aa11.79□□□□□ -0.52
USP42-206ENST00000479544 VDAC1P21796 283 aa11.79□□□□□ -0.52
USP42-206ENST00000479544 ARG2P78540 354 aa11.79□□□□□ -0.52
USP42-206ENST00000479544 PYY3Q5JQD4 70 aa11.79□□□□□ -0.52
USP42-206ENST00000479544 PRAMEF5Q5TYX0 476 aa11.79□□□□□ -0.52
USP42-206ENST00000479544 PRAMEF6Q5VXH4 476 aa11.79□□□□□ -0.52
USP42-206ENST00000479544 C16orf82Q7Z2V1 217 aa11.79□□□□□ -0.52
USP42-206ENST00000479544 OR4A16Q8NH70 328 aa11.79□□□□□ -0.52
USP42-206ENST00000479544 RTBDNQ9BSG5 229 aaPredicted RBP11.79□□□□□ -0.52
USP42-206ENST00000479544 CTDSP1Q9GZU7 261 aa11.79□□□□□ -0.52
USP42-206ENST00000479544 SIRT7Q9NRC8 400 aa11.79□□□□□ -0.52
USP42-206ENST00000479544 PISDQ9UG56 409 aa11.79□□□□□ -0.52
USP42-206ENST00000479544 IL2RAP01589 272 aa11.79□□□□□ -0.52
USP42-206ENST00000479544 CD27P26842 260 aa11.79□□□□□ -0.52
USP42-206ENST00000479544 TEX30Q5JUR7 227 aa11.79□□□□□ -0.52
USP42-206ENST00000479544 UTP23Q9BRU9 249 aaKnown RBP11.79□□□□□ -0.52
USP42-206ENST00000479544 CER1O95813 267 aa11.79□□□□□ -0.52
USP42-206ENST00000479544 CNEP1R1Q8N9A8 125 aa11.79□□□□□ -0.52
USP42-206ENST00000479544 ZNF814B7Z6K7 855 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 MS4A18H0YCH9 400 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 PTTG1IPP53801 180 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 COL19A1Q14993 1142 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 MS4A18Q3C1V0 323 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 ABHD17BQ5VST6 288 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 VHLLQ6RSH7 139 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 BTNL8Q6UX41 500 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 OR10AD1Q8NGE0 317 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 OR10G4Q8NGN3 311 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 OR10G9Q8NGN4 311 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 OR10G7Q8NGN6 311 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 TMEM230Q96A57 120 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 LHFPL6Q9Y693 200 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 TMEM14DPA8MWL7 114 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 FCN1O00602 326 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 SNRPCP09234 159 aaKnown RBP11.78□□□□□ -0.52
USP42-206ENST00000479544 PCP4P48539 62 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 AMTP48728 403 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 FUT6P51993 359 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 ERVFC1-1P60608 527 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 PAQR4Q8N4S7 273 aaPredicted RBP11.78□□□□□ -0.52
USP42-206ENST00000479544 ZNF488Q96MN9 340 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 TPPP3Q9BW30 176 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 FAM206AQ9NX38 181 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 PLA2G3Q9NZ20 509 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 SYNGR2O43760 224 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 OR7C2O60412 319 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 FOXB1Q99853 325 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 DDA1Q9BW61 102 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 SMOC1Q9H4F8 434 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 B4GALT7Q9UBV7 327 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 NAT8BQ9UHF3 227 aa11.78□□□□□ -0.52
USP42-206ENST00000479544 VAMP5O95183 116 aa11.77□□□□□ -0.52
USP42-206ENST00000479544 FCGR3AP08637 254 aa11.77□□□□□ -0.52
USP42-206ENST00000479544 HNRNPA3P51991 378 aaKnown RBP11.77□□□□□ -0.52
USP42-206ENST00000479544 REC114Q7Z4M0 266 aa11.77□□□□□ -0.52
USP42-206ENST00000479544 MRPL30Q8TCC3 161 aaKnown RBP11.77□□□□□ -0.52
USP42-206ENST00000479544 SPACA9Q96E40 222 aaPredicted RBP11.77□□□□□ -0.52
USP42-206ENST00000479544 CYTL1Q9NRR1 136 aa11.77□□□□□ -0.52
USP42-206ENST00000479544 TSC2P49815 1807 aa11.77□□□□□ -0.52
USP42-206ENST00000479544 HOXA5P20719 270 aa11.77□□□□□ -0.52
USP42-206ENST00000479544 GALNSP34059 522 aa11.77□□□□□ -0.52
USP42-206ENST00000479544 PAX5Q02548 391 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms