RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 PECRQ9BY49 303 aa5.57□□□□□ -1.52
VAMP3-202ENST00000470357 C12orf4Q9NQ89 552 aa5.57□□□□□ -1.52
VAMP3-202ENST00000470357 TREM2Q9NZC2 230 aa5.57□□□□□ -1.52
VAMP3-202ENST00000470357 RCC2Q9P258 522 aaKnown RBP5.57□□□□□ -1.52
VAMP3-202ENST00000470357 COPZ2Q9P299 210 aa5.57□□□□□ -1.52
VAMP3-202ENST00000470357 MGAT4AQ9UM21 535 aa5.57□□□□□ -1.52
VAMP3-202ENST00000470357 EDARQ9UNE0 448 aa5.57□□□□□ -1.52
VAMP3-202ENST00000470357 DOCK11Q5JSL3 2073 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 A0A0A6YYD4 124 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 TRAV38-1A0A0B4J264 116 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 KRTAP4-8A0A0G2JLE6 195 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 IGHV1-69-2A0A0G2JMI3 117 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 ANKRD20A5PA0PJZ0 165 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 FUOMA2VDF0 154 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 NKX6-3A6NJ46 265 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 LYRM1O43325 122 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 NDUFA2O43678 99 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 ORC5O43913 435 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 HAND1O96004 215 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 LHBP01229 141 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 AKAIN1P0CW23 69 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 GNB3P16520 340 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 LMO1P25800 156 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 TAS2R46P59540 309 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 CCL8P80075 99 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 MADCAM1Q13477 382 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 MEF2DQ14814 521 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 SRSF7Q16629 238 aaKnown RBP eCLIP5.56□□□□□ -1.52
VAMP3-202ENST00000470357 HFEQ30201 348 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 TRIM16LQ309B1 348 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 PAN3Q58A45 887 aaKnown RBP5.56□□□□□ -1.52
VAMP3-202ENST00000470357 PLAC9Q5JTB6 97 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 ZNF826PQ6ZT77 177 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 MOB1BQ7L9L4 216 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 C6orf201Q7Z4U5 140 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 TRAPPC6BQ86SZ2 158 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 PEG10Q86TG7 708 aaKnown RBP5.56□□□□□ -1.52
VAMP3-202ENST00000470357 BIVMQ86UB2 503 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 DTX3Q8N9I9 347 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 POC5Q8NA72 575 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 TMEM229BQ8NBD8 167 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 OR5D13Q8NGL4 314 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 NEK7Q8TDX7 302 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 C20orf173Q96LM9 149 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 SMR3AQ99954 134 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 VRK1Q99986 396 aaPredicted RBP5.56□□□□□ -1.52
VAMP3-202ENST00000470357 TRAF4Q9BUZ4 470 aaPredicted RBP5.56□□□□□ -1.52
VAMP3-202ENST00000470357 DNTTIP1Q9H147 329 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 LIME1Q9H400 295 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 NLKQ9UBE8 527 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 CACNG2Q9Y698 323 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 CUBNO60494 3623 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 MXRA5Q9NR99 2828 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 ZANQ9Y493 2812 aa5.56□□□□□ -1.52
VAMP3-202ENST00000470357 PPIAL4EA0A075B759 164 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 TRBV6-6A0A0A6YYG2 114 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 KIR2DS1A0A191URI9 304 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 FAM240BA0A1B0GVZ2 78 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 OOEPA6NGQ2 149 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 OR2AT4A6NND4 320 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 ZNF736B4DX44 427 aaPredicted RBP5.55□□□□□ -1.52
VAMP3-202ENST00000470357 PPIAL4DF5H284 164 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 F8VVB4 439 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 F8VWA3 439 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 LGALS8O00214 317 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 CSN2P05814 226 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 DANCRP0C864 163 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 PPIAL4FP0DN26 164 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 NAT1P18440 290 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 KIR2DS4P43632 304 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 SNU13P55769 128 aaKnown RBP5.55□□□□□ -1.52
VAMP3-202ENST00000470357 PAX5Q02548 391 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 KLF9Q13886 244 aaPredicted RBP5.55□□□□□ -1.52
VAMP3-202ENST00000470357 KIR2DS1Q14954 304 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 ZMYND11Q15326 602 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 RNASE10Q5GAN6 216 aaKnown RBP5.55□□□□□ -1.52
VAMP3-202ENST00000470357 LCE4AQ5TA78 99 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 TEX36Q5VZQ5 186 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 SIGIRRQ6IA17 410 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 C11orf71Q6IPW1 123 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 STEAP1BQ6NZ63 245 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 Q6P435 159 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 TRAT1Q6PIZ9 186 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 Q6ZS49 121 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 SLC36A1Q7Z2H8 476 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 TMEM17Q86X19 198 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 HOGA1Q86XE5 327 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 ZNF561Q8N587 486 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 GCSAMQ8N6F7 178 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 SUMF2Q8NBJ7 301 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 ENKURQ8TC29 256 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 CHPT1Q8WUD6 406 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 NUDCD2Q8WVJ2 157 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 RDH5Q92781 318 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 TIMD4Q96H15 378 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 MED30Q96HR3 178 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 ZNF488Q96MN9 340 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 FAAP24Q9BTP7 215 aa5.55□□□□□ -1.52
VAMP3-202ENST00000470357 DPCDQ9BVM2 203 aaPredicted RBP5.55□□□□□ -1.52
VAMP3-202ENST00000470357 FAM234AQ9H0X4 552 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms