RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 ACP5P13686 325 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 PVRP15151 417 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 HIST1H1DP16402 221 aaKnown RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 CD34P28906 385 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 PRDX3P30048 256 aaKnown RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 P2RY1P47900 373 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 LHX2P50458 406 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 SGSHP51688 502 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 VAMP7P51809 220 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 UBE2MP61081 183 aaKnown RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 RPS15AP62244 130 aaKnown RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 ENDOGQ14249 297 aaKnown RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 EXOSC7Q15024 291 aaKnown RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 FAM174BQ3ZCQ3 159 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 ALG10Q5BKT4 473 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 GLYATL3Q5SZD4 288 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 AADACL3Q5VUY0 350 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 OTPQ5XKR4 325 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 TMEM215Q68D42 235 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF626Q68DY1 528 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF57Q68EA5 555 aaPredicted RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 AMMECR1LQ6DCA0 310 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 SLC18B1Q6NT16 456 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 MRPL54Q6P161 138 aaKnown RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 TIFABQ6ZNK6 161 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 DET1Q7L5Y6 550 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 GPRIN1Q7Z2K8 1008 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 BCL6BQ8N143 479 aaPredicted RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 PGBD5Q8N414 524 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 KRTCAP2Q8N6L1 136 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 B3GALNT2Q8NCR0 500 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 OR13A1Q8NGR1 328 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 OR4L1Q8NH43 312 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 OR5AK2Q8NH90 309 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 FNDC9Q8TBE3 224 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 SLC25A40Q8TBP6 338 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 Q8TCH9 128 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF675Q8TD23 568 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 SECTM1Q8WVN6 248 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 RXFP2Q8WXD0 754 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 MSI2Q96DH6 328 aaKnown RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 RTP4Q96DX8 246 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 ZMYND19Q96E35 227 aaPredicted RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 PELI1Q96FA3 418 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 AJUBAQ96IF1 538 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 GPER1Q99527 375 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 GABRG3Q99928 467 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 NIPSNAP3BQ9BS92 247 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 LRRC61Q9BV99 259 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 DPY30Q9C005 99 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 DEFB129Q9H1M3 183 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 RLIMQ9NVW2 624 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 TMEM242Q9NWH2 141 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 TXNL4BQ9NX01 149 aaKnown RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 FLRT1Q9NZU1 646 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 MARCOQ9UEW3 520 aaPredicted RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 ST6GALNAC2Q9UJ37 374 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 ANXA10Q9UJ72 324 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 VDAC3Q9Y277 283 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 NTNG1Q9Y2I2 539 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 RPL36Q9Y3U8 105 aaKnown RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 RBBP6Q7Z6E9 1792 aaKnown RBP4.39□□□□□ -1.71
COL3A1-205ENST00000470167 SCN11AQ9UI33 1791 aa4.39□□□□□ -1.71
COL3A1-205ENST00000470167 XIRP1Q702N8 1843 aaKnown RBP4.38□□□□□ -1.71
COL3A1-205ENST00000470167 A0A0D9SFI3 127 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 CASTOR2A6NHX0 329 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 F5H5P2 479 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 H0YJW9 148 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 H7C1C5 153 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 K7EP34 96 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 WNT10BO00744 389 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 SYNGR1O43759 233 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 HYPMO75409 117 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 CRLF1O75462 422 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 SOX14O95416 240 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 PLA2G1BP04054 148 aaKnown RBP4.38□□□□□ -1.71
COL3A1-205ENST00000470167 SP1P08047 785 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 CXCL1P09341 107 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 BCKDHAP12694 445 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 HGFP14210 728 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 RPL7P18124 248 aaKnown RBP4.38□□□□□ -1.71
COL3A1-205ENST00000470167 RPL12P30050 165 aaKnown RBP4.38□□□□□ -1.71
COL3A1-205ENST00000470167 TSPOP30536 169 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 RPL3P39023 403 aaKnown RBP4.38□□□□□ -1.71
COL3A1-205ENST00000470167 ATP4BP51164 291 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF83P51522 516 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 DIO3P55073 304 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 TAS2R19P59542 299 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 SLC35B1P78383 322 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 CDK3Q00526 305 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 PSG9Q00887 426 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 KLRB1Q12918 225 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 PSG7Q13046 419 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 FAM53BQ14153 422 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 PMVKQ15126 192 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 MLANAQ16655 118 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 GGTA1PQ4G0N0 100 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 PRR30Q53SZ7 412 aaPredicted RBP4.38□□□□□ -1.71
COL3A1-205ENST00000470167 SPANXN3Q5MJ09 141 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 TEX36Q5VZQ5 186 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms