RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 BARHL1Q9BZE3 327 aa19.43■□□□□ 0.7
PTCH1-210ENST00000468211 FAM192AQ9GZU8 254 aa19.43■□□□□ 0.7
PTCH1-210ENST00000468211 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.43■□□□□ 0.7
PTCH1-210ENST00000468211 RPL36Q9Y3U8 105 aaKnown RBP19.43■□□□□ 0.7
PTCH1-210ENST00000468211 WBP4O75554 376 aaKnown RBP19.42■□□□□ 0.7
PTCH1-210ENST00000468211 HTR3BO95264 441 aa19.42■□□□□ 0.7
PTCH1-210ENST00000468211 RPSAP08865 295 aaKnown RBP19.42■□□□□ 0.7
PTCH1-210ENST00000468211 C21orf33P30042 268 aaPredicted RBP19.42■□□□□ 0.7
PTCH1-210ENST00000468211 SSTR5P35346 364 aa19.42■□□□□ 0.7
PTCH1-210ENST00000468211 ETV1P50549 477 aa19.42■□□□□ 0.7
PTCH1-210ENST00000468211 RSU1Q15404 277 aa19.42■□□□□ 0.7
PTCH1-210ENST00000468211 THNSL2Q86YJ6 484 aa19.42■□□□□ 0.7
PTCH1-210ENST00000468211 OR4X2Q8NGF9 303 aa19.42■□□□□ 0.7
PTCH1-210ENST00000468211 ORAI1Q96D31 301 aa19.42■□□□□ 0.7
PTCH1-210ENST00000468211 FGF20Q9NP95 211 aaPredicted RBP19.42■□□□□ 0.7
PTCH1-210ENST00000468211 MOB4Q9Y3A3 225 aa19.42■□□□□ 0.7
PTCH1-210ENST00000468211 SIRT4Q9Y6E7 314 aaPredicted RBP19.42■□□□□ 0.7
PTCH1-210ENST00000468211 HSPE1-MOB4S4R3N1 261 aa19.42■□□□□ 0.7
PTCH1-210ENST00000468211 A0A1W2PPE3 182 aa19.41■□□□□ 0.7
PTCH1-210ENST00000468211 M0QZK8 103 aa19.41■□□□□ 0.7
PTCH1-210ENST00000468211 PF4P02776 101 aa19.41■□□□□ 0.7
PTCH1-210ENST00000468211 FAM106CPP0CH98 169 aa19.41■□□□□ 0.7
PTCH1-210ENST00000468211 GNG10P50151 68 aa19.41■□□□□ 0.7
PTCH1-210ENST00000468211 PAX5Q02548 391 aa19.41■□□□□ 0.7
PTCH1-210ENST00000468211 KLHL22Q53GT1 634 aa19.41■□□□□ 0.7
PTCH1-210ENST00000468211 KHDC1LQ5JSQ8 128 aa19.41■□□□□ 0.7
PTCH1-210ENST00000468211 OR2G6Q5TZ20 316 aa19.41■□□□□ 0.7
PTCH1-210ENST00000468211 OSR2Q8N2R0 312 aa19.41■□□□□ 0.7
PTCH1-210ENST00000468211 SUMF2Q8NBJ7 301 aa19.41■□□□□ 0.7
PTCH1-210ENST00000468211 S100A14Q9HCY8 104 aa19.41■□□□□ 0.7
PTCH1-210ENST00000468211 AMMECR1Q9Y4X0 333 aaPredicted RBP19.41■□□□□ 0.7
PTCH1-210ENST00000468211 COL7A1Q02388 2944 aa19.4■□□□□ 0.7
PTCH1-210ENST00000468211 MAGEB3O15480 346 aa19.4■□□□□ 0.7
PTCH1-210ENST00000468211 MPIG6BO95866 241 aa19.4■□□□□ 0.7
PTCH1-210ENST00000468211 ZNF329Q86UD4 541 aa19.4■□□□□ 0.7
PTCH1-210ENST00000468211 PQLC1Q8N2U9 271 aa19.4■□□□□ 0.7
PTCH1-210ENST00000468211 GPR148Q8TDV2 347 aa19.4■□□□□ 0.7
PTCH1-210ENST00000468211 DPCDQ9BVM2 203 aaPredicted RBP19.4■□□□□ 0.7
PTCH1-210ENST00000468211 K7EIL1 84 aa19.39■□□□□ 0.69
PTCH1-210ENST00000468211 KRTAP10-11P60412 298 aa19.39■□□□□ 0.69
PTCH1-210ENST00000468211 MADCAM1Q13477 382 aa19.39■□□□□ 0.69
PTCH1-210ENST00000468211 HNF4GQ14541 408 aa19.39■□□□□ 0.69
PTCH1-210ENST00000468211 FAM53AQ6NSI3 398 aaPredicted RBP19.39■□□□□ 0.69
PTCH1-210ENST00000468211 RPL22L1Q6P5R6 122 aaKnown RBP19.39■□□□□ 0.69
PTCH1-210ENST00000468211 C5orf56Q8N8D9 126 aa19.39■□□□□ 0.69
PTCH1-210ENST00000468211 OR13C5Q8NGS8 318 aa19.39■□□□□ 0.69
PTCH1-210ENST00000468211 TMEM106AQ96A25 262 aa19.39■□□□□ 0.69
PTCH1-210ENST00000468211 CPNE2Q96FN4 548 aaPredicted RBP19.39■□□□□ 0.69
PTCH1-210ENST00000468211 NOL4LQ96MY1 436 aaPredicted RBP19.39■□□□□ 0.69
PTCH1-210ENST00000468211 PCDHB16Q9NRJ7 776 aa19.39■□□□□ 0.69
PTCH1-210ENST00000468211 ING4Q9UNL4 249 aa19.39■□□□□ 0.69
PTCH1-210ENST00000468211 ST3GAL6Q9Y274 331 aa19.39■□□□□ 0.69
PTCH1-210ENST00000468211 PSMB11A5LHX3 300 aa19.38■□□□□ 0.69
PTCH1-210ENST00000468211 HES1Q14469 280 aa19.38■□□□□ 0.69
PTCH1-210ENST00000468211 ETV3LQ6ZN32 361 aa19.38■□□□□ 0.69
PTCH1-210ENST00000468211 GEMIN2O14893 280 aaKnown RBP19.37■□□□□ 0.69
PTCH1-210ENST00000468211 LALBAP00709 142 aa19.37■□□□□ 0.69
PTCH1-210ENST00000468211 TMEM11P17152 192 aa19.37■□□□□ 0.69
PTCH1-210ENST00000468211 KCNJ3P48549 501 aa19.37■□□□□ 0.69
PTCH1-210ENST00000468211 RBM11P57052 281 aaKnown RBP19.37■□□□□ 0.69
PTCH1-210ENST00000468211 SLC35A2P78381 396 aa19.37■□□□□ 0.69
PTCH1-210ENST00000468211 CCDC58Q4VC31 144 aa19.37■□□□□ 0.69
PTCH1-210ENST00000468211 DDI2Q5TDH0 399 aa19.37■□□□□ 0.69
PTCH1-210ENST00000468211 C18orf65Q6ZTR6 163 aa19.37■□□□□ 0.69
PTCH1-210ENST00000468211 LINC00482Q8N8I6 264 aa19.37■□□□□ 0.69
PTCH1-210ENST00000468211 UBALD1Q8TB05 177 aa19.37■□□□□ 0.69
PTCH1-210ENST00000468211 HAVCR2Q8TDQ0 301 aa19.37■□□□□ 0.69
PTCH1-210ENST00000468211 IFT22Q9H7X7 185 aa19.37■□□□□ 0.69
PTCH1-210ENST00000468211 IL36GQ9NZH8 169 aa19.37■□□□□ 0.69
PTCH1-210ENST00000468211 LINC00527Q9UJ94 153 aa19.37■□□□□ 0.69
PTCH1-210ENST00000468211 A0A1W2PP11 408 aa19.36■□□□□ 0.69
PTCH1-210ENST00000468211 OR7C1O76099 320 aaPredicted RBP19.36■□□□□ 0.69
PTCH1-210ENST00000468211 IGKV1D-33P01593 117 aa19.36■□□□□ 0.69
PTCH1-210ENST00000468211 IGKV1-33P01594 117 aa19.36■□□□□ 0.69
PTCH1-210ENST00000468211 CD2P06729 351 aa19.36■□□□□ 0.69
PTCH1-210ENST00000468211 RAB7AP51149 207 aa19.36■□□□□ 0.69
PTCH1-210ENST00000468211 NHLRC3Q5JS37 347 aa19.36■□□□□ 0.69
PTCH1-210ENST00000468211 OR10A7Q8NGE5 316 aa19.36■□□□□ 0.69
PTCH1-210ENST00000468211 OR52N1Q8NH53 320 aa19.36■□□□□ 0.69
PTCH1-210ENST00000468211 RCC1LQ96I51 464 aaKnown RBP19.36■□□□□ 0.69
PTCH1-210ENST00000468211 METTL9Q9H1A3 318 aa19.36■□□□□ 0.69
PTCH1-210ENST00000468211 TMEM138Q9NPI0 162 aa19.36■□□□□ 0.69
PTCH1-210ENST00000468211 CLEC2DQ9UHP7 191 aa19.36■□□□□ 0.69
PTCH1-210ENST00000468211 MAGEA13PA6NCF6 341 aa19.35■□□□□ 0.69
PTCH1-210ENST00000468211 C15orf65H3BRN8 121 aa19.35■□□□□ 0.69
PTCH1-210ENST00000468211 OGG1O15527 345 aa19.35■□□□□ 0.69
PTCH1-210ENST00000468211 CLIC3O95833 236 aa19.35■□□□□ 0.69
PTCH1-210ENST00000468211 SERPINA2P20848 420 aa19.35■□□□□ 0.69
PTCH1-210ENST00000468211 ZNF93P35789 620 aaPredicted RBP19.35■□□□□ 0.69
PTCH1-210ENST00000468211 REG1BP48304 166 aa19.35■□□□□ 0.69
PTCH1-210ENST00000468211 SLC16A12Q6ZSM3 486 aa19.35■□□□□ 0.69
PTCH1-210ENST00000468211 OR8H3Q8N146 312 aa19.35■□□□□ 0.69
PTCH1-210ENST00000468211 OR10X1Q8NGY0 326 aa19.35■□□□□ 0.69
PTCH1-210ENST00000468211 IGHV3-72A0A0B4J1Y9 119 aa19.34■□□□□ 0.69
PTCH1-210ENST00000468211 WI2-2373I1.2A0A1W2PRP0 233 aa19.34■□□□□ 0.69
PTCH1-210ENST00000468211 LINC01548A6NM66 108 aa19.34■□□□□ 0.69
PTCH1-210ENST00000468211 DCKP27707 260 aa19.34■□□□□ 0.69
PTCH1-210ENST00000468211 BDKRB2P30411 391 aa19.34■□□□□ 0.69
PTCH1-210ENST00000468211 HOXD3P31249 432 aaPredicted RBP19.34■□□□□ 0.69
PTCH1-210ENST00000468211 MRPL41Q8IXM3 137 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms