RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 C17orf107Q6ZR85 190 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 WFDC8Q8IUA0 241 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 C1orf87Q8N0U7 546 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 LRRC29Q8WV35 223 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 IL22RA2Q969J5 263 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 LURAP1Q96LR2 239 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 C2orf50Q96LR7 162 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 ZNF488Q96MN9 340 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 HS3ST6Q96QI5 342 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 FXYD6Q9H0Q3 95 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 SLC2A9Q9NRM0 540 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 RNF7Q9UBF6 113 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 OR2W1Q9Y3N9 320 aa8.6□□□□□ -1.03
MSH5-213ENST00000468136 HEATR1Q9H583 2144 aaKnown RBP8.6□□□□□ -1.03
MSH5-213ENST00000468136 PIEZO1Q92508 2521 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 FREM2Q5SZK8 3169 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 POLEQ07864 2286 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 FAM221AA4D161 298 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 C5orf51A6NDU8 294 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 DPRXA6NFQ7 191 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 ZSCAN5BA6NJL1 495 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 G3V3Q6 166 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 SMLR1H3BR10 107 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 SIRPB1O00241 398 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 CCL21O00585 134 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 ABCD4O14678 606 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 MGST3O14880 152 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 LHBP01229 141 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 C1QTNF9P0C862 333 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 MUC1P15941 1255 aaPredicted RBP8.59□□□□□ -1.03
MSH5-213ENST00000468136 GZMHP20718 246 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 AADACP22760 399 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 PSMB6P28072 239 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 DUSP1P28562 367 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 NUP62P37198 522 aaPredicted RBP8.59□□□□□ -1.03
MSH5-213ENST00000468136 TNFAIP6P98066 277 aaPredicted RBP8.59□□□□□ -1.03
MSH5-213ENST00000468136 IFITM2Q01629 132 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 PDCD1Q15116 288 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 EFNB3Q15768 340 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 BEX5Q5H9J7 111 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 NCMAPQ5T1S8 102 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 C11orf87Q6NUJ2 197 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 LIAT1Q6ZQX7 453 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 H1FOOQ8IZA3 346 aaPredicted RBP8.59□□□□□ -1.03
MSH5-213ENST00000468136 TCTEX1D1Q8N7M0 179 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 OR11H4Q8NGC9 324 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 FAM222BQ8WU58 562 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 DYRK2Q92630 601 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 TOMM40LQ969M1 308 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 GALMQ96C23 342 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 OR2V2Q96R30 315 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 SPIN2AQ99865 258 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 SPIN2BQ9BPZ2 258 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 MRPL37Q9BZE1 423 aaKnown RBP8.59□□□□□ -1.03
MSH5-213ENST00000468136 FAM234AQ9H0X4 552 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 DNTTIP1Q9H147 329 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 MS4A5Q9H3V2 200 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 METTL8Q9H825 291 aaKnown RBP8.59□□□□□ -1.03
MSH5-213ENST00000468136 ZNF581Q9P0T4 197 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 IL36RNQ9UBH0 155 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 DNAJB11Q9UBS4 358 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 SH3BGRL2Q9UJC5 107 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 TMED3Q9Y3Q3 217 aa8.59□□□□□ -1.03
MSH5-213ENST00000468136 RNF212BA8MTL3 300 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 C17orf100A8MU93 164 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.58□□□□□ -1.04
MSH5-213ENST00000468136 BET1O15155 118 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 MPPED1O15442 326 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 RLN2P04090 185 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 THBDP07204 575 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 CD3EP07766 207 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 SCTP09683 121 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 AGAP20933 346 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 S100A11P31949 105 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 PRDX2P32119 198 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 SERPINF1P36955 418 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 LUMP51884 338 aaPredicted RBP8.58□□□□□ -1.04
MSH5-213ENST00000468136 FXYD4P59646 89 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 BSPH1Q075Z2 132 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 BAMBIQ13145 260 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 TMEM187Q14656 261 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 C2orf68Q2NKX9 166 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 CR1LQ2VPA4 569 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 LGALSLQ3ZCW2 172 aaPredicted RBP8.58□□□□□ -1.04
MSH5-213ENST00000468136 IGSF11Q5DX21 431 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 DCAF12L2Q5VW00 463 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 PRAMEF6Q5VXH4 476 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 VHLLQ6RSH7 139 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 PCSK4Q6UW60 755 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 ACOT7LQ6ZUV0 252 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 NCCRP1Q6ZVX7 275 aaPredicted RBP8.58□□□□□ -1.04
MSH5-213ENST00000468136 ZNF546Q86UE3 836 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 LDLRAD3Q86YD5 345 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 ZNF808Q8N4W9 903 aaPredicted RBP8.58□□□□□ -1.04
MSH5-213ENST00000468136 ZNF561Q8N587 486 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 INO80EQ8NBZ0 244 aaPredicted RBP8.58□□□□□ -1.04
MSH5-213ENST00000468136 BVESQ8NE79 360 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 PPP1R1CQ8WVI7 109 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 FAM122AQ96E09 287 aa8.58□□□□□ -1.04
MSH5-213ENST00000468136 ABHD14BQ96IU4 210 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms