RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 COPZ2Q9P299 210 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 KAAG1Q9UBP8 84 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 OPN4Q9UHM6 478 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 TBC1D24Q9ULP9 559 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 MGAT4AQ9UM21 535 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 PPP1R3CQ9UQK1 317 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 WIPI2Q9Y4P8 454 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 PLCE1Q9P212 2302 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 ICE1Q9Y2F5 2266 aa4.58□□□□□ -1.68
VPS41-211ENST00000466017 DSPP15924 2871 aaKnown RBP4.58□□□□□ -1.68
VPS41-211ENST00000466017 ZZEF1O43149 2961 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 SPENQ96T58 3664 aaKnown RBP4.57□□□□□ -1.68
VPS41-211ENST00000466017 RAI1Q7Z5J4 1906 aaPredicted RBP4.57□□□□□ -1.68
VPS41-211ENST00000466017 TRAV38-1A0A0B4J264 116 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 TRAV24A0A0B4J272 114 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 A0A1W2PPR1 153 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 A0A1W2PQ09 198 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 MEIOCA2RUB1 952 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 FUOMA2VDF0 154 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 LRRC30A6NM36 301 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 TMEM178BH3BS89 294 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.57□□□□□ -1.68
VPS41-211ENST00000466017 LGALS8O00214 317 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 LYRM1O43325 122 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 LANCL1O43813 399 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 SSX5O60225 188 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 OR7C1O76099 320 aaPredicted RBP4.57□□□□□ -1.68
VPS41-211ENST00000466017 NXPH2O95156 264 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 OR2H2O95918 312 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 CD3GP09693 182 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 CTXN2P0C2S0 81 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 RNF224P0DH78 156 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 PSG2P11465 335 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 PAX1P15863 534 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 GABRR1P24046 479 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 SLC6A1P30531 599 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 PRDX2P32119 198 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 FAUP35544 74 aaKnown RBP4.57□□□□□ -1.68
VPS41-211ENST00000466017 INPP1P49441 399 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 TMEM33P57088 247 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 GNG2P59768 71 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 ARFRP1Q13795 201 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 MEF2DQ14814 521 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 ZMYND11Q15326 602 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 KCNJ8Q15842 424 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 RGS21Q2M5E4 152 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 PIGYQ3MUY2 71 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 ACTBL2Q562R1 376 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 VAX1Q5SQQ9 334 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 PRAMEF6Q5VXH4 476 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 SLC35E4Q6ICL7 350 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 Q6ZNX1 250 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 ZNF788Q6ZQV5 615 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 ZNF826PQ6ZT77 177 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 GDPD3Q7L5L3 318 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 MOGAT3Q86VF5 341 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 SNX29P2Q8IUI4 249 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 IZUMO1Q8IYV9 350 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 ZNF561Q8N587 486 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 POC5Q8NA72 575 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 ANGPTL6Q8NI99 470 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 LRRC29Q8WV35 223 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 RDH5Q92781 318 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 CMSS1Q9BQ75 279 aaKnown RBP4.57□□□□□ -1.68
VPS41-211ENST00000466017 SULT4A1Q9BR01 284 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 FAAP24Q9BTP7 215 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 TOLLIPQ9H0E2 274 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 ALX4Q9H161 411 aaPredicted RBP4.57□□□□□ -1.68
VPS41-211ENST00000466017 PLEKHF2Q9H8W4 249 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 SAP30LQ9HAJ7 183 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 HRASLSQ9HDD0 168 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 DYNLRB1Q9NP97 96 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 MYOZ1Q9NP98 299 aaPredicted RBP4.57□□□□□ -1.68
VPS41-211ENST00000466017 DECR2Q9NUI1 292 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 TMEM106BQ9NUM4 274 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 SLC2A8Q9NY64 477 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 C11orf21Q9P2W6 132 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 NLKQ9UBE8 527 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 ZNF222Q9UK12 451 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 BOD1L1Q8NFC6 3051 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 SPTBN1Q01082 2364 aaKnown RBP4.57□□□□□ -1.68
VPS41-211ENST00000466017 DYSFO75923 2080 aa4.57□□□□□ -1.68
VPS41-211ENST00000466017 CHD3Q12873 2000 aaKnown RBP4.56□□□□□ -1.68
VPS41-211ENST00000466017 ABCA4P78363 2273 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 PPIAL4EA0A075B759 164 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 IGHV1-69-2A0A0G2JMI3 117 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 TMEM235A6NFC5 223 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 OOEPA6NGQ2 149 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 PRSS29PA6NIE9 313 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 RFPL4AA6NLU0 287 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 OR2AT4A6NND4 320 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 CEACAM18A8MTB9 384 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 PPIAL4DF5H284 164 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 RFPL4AL1F8VTS6 287 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 K7N7A8 449 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 SLC33A1O00400 549 aaPredicted RBP4.56□□□□□ -1.68
VPS41-211ENST00000466017 MGST3O14880 152 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 ZNF737O75373 536 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 HAND1O96004 215 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 MT-ND4P03905 459 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms