RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 MMDQ15546 238 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 NSDHLQ15738 373 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 KMT5CQ86Y97 462 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 PLXDC1Q8IUK5 500 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 CCDC71LQ8N9Z2 235 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 OR8G5Q8NG78 346 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 ZCCHC14Q8WYQ9 949 aaKnown RBP11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 KLHDC3Q9BQ90 382 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 RTN4RQ9BZR6 473 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 CSTL1Q9H114 145 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 FAM221AA4D161 298 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 ANKUB1A6NFN9 424 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 ERVS71-1P61550 626 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 OTPQ5XKR4 325 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 ELL3Q9HB65 397 aaPredicted RBP11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 ASXL3Q9C0F0 2248 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 LOC105371242A0A075B767 164 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 OR5G3P0C626 314 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 SRPXP78539 464 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 LINC00346Q8IVM7 164 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 CLDND2Q8NHS1 167 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 CTDSP1Q9GZU7 261 aa11.7□□□□□ -0.54
SYNGAP1-204ENST00000449372 SDCBPO00560 298 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 DUX1O43812 170 aa11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 TMEM183BQ1AE95 376 aa11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 IL22RA1Q8N6P7 574 aa11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 ZNF441Q8N8Z8 693 aa11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 IL22RA2Q969J5 263 aa11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 MRPL24Q96A35 216 aaKnown RBP11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 PGAM5Q96HS1 289 aa11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 SPIN2AQ99865 258 aa11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 SPIN2BQ9BPZ2 258 aa11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 M0QZ24 198 aa11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 SNU13P55769 128 aaKnown RBP11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 STPG4Q8N801 248 aa11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 ST6GALNAC5Q9BVH7 336 aa11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 WWTR1Q9GZV5 400 aa11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 UNC119Q13432 240 aa11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 CLEC12BQ2HXU8 276 aa11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 MPV17LQ2QL34 196 aa11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 TMEM123Q8N131 208 aa11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 OR5L2Q8NGL0 311 aa11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 OR13G1Q8NGZ3 307 aa11.69□□□□□ -0.54
SYNGAP1-204ENST00000449372 TRAPPC6AO75865 159 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 ATP6V0CP27449 155 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 C1QL3Q5VWW1 255 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 FAM90A2PQ658T7 463 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 S100A7AQ86SG5 101 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 OR4C5Q8NGB2 326 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 NUDT22Q9BRQ3 303 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 RBKSQ9H477 322 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 SIT1Q9Y3P8 196 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 RP1P56715 2156 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 ALPK2Q86TB3 2170 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 NSG1A0A0A6YYJ2 146 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 NPIPB7O75200 414 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 ATXN8OSP0DMR3 200 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 CD33P20138 364 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 IL24Q13007 206 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 ACOT6Q3I5F7 207 aaPredicted RBP11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 CST9LP1Q5W188 147 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 C11orf40Q8WZ69 217 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 RBMXL1Q96E39 390 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 SDF2L1Q9HCN8 221 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 CACNA1EQ15878 2313 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 CTSDP07339 412 aaPredicted RBP11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 PFN1P07737 140 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 PTGER4P35408 488 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 FAM3BP58499 235 aaPredicted RBP11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 ZFP36L1Q07352 338 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 PRSS8Q16651 343 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 TGIF2LYQ8IUE0 185 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 RHBDD1Q8TEB9 315 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 C10orf35Q96D05 121 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 VAMP8Q9BV40 100 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 LPAR5Q9H1C0 372 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 ZNF701Q9NV72 531 aaPredicted RBP11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 RBM7Q9Y580 266 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 CPAMD8Q8IZJ3 1885 aa11.68□□□□□ -0.54
SYNGAP1-204ENST00000449372 TTRP02766 147 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 GZMHP20718 246 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 OR10S1Q8NGN2 331 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 PP6455Q8WZ26 134 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 TUBG2Q9NRH3 451 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 ANAPC10Q9UM13 185 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 ZNF43P17038 809 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 BLVRBP30043 206 aaPredicted RBP11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 BIDP55957 195 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 ZNF266Q14584 549 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 TMPRSS7Q7RTY8 843 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 UBALD2Q8IYN6 164 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 TNFRSF14Q92956 283 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 PYGO2Q9BRQ0 406 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 PCGF1Q9BSM1 259 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 FAM206AQ9NX38 181 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 IGLV3-12A0A075B6K2 115 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 A0A1B0GX78 115 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 S100GP29377 79 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 CNN1P51911 297 aaKnown RBP11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 OR51E1Q8TCB6 317 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms