RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 OAFQ86UD1 273 aa2.33□□□□□ -2.04
PMS1-215ENST00000447232 ANGPTL5Q86XS5 388 aa2.33□□□□□ -2.04
PMS1-215ENST00000447232 UBE2DNLQ8IWF7 75 aa2.33□□□□□ -2.04
PMS1-215ENST00000447232 TIGD4Q8IY51 512 aa2.33□□□□□ -2.04
PMS1-215ENST00000447232 SLC35F6Q8N357 371 aa2.33□□□□□ -2.04
PMS1-215ENST00000447232 RNF148Q8N7C7 305 aa2.33□□□□□ -2.04
PMS1-215ENST00000447232 OR52B4Q8NGK2 314 aa2.33□□□□□ -2.04
PMS1-215ENST00000447232 OR4C15Q8NGM1 316 aa2.33□□□□□ -2.04
PMS1-215ENST00000447232 GPX7Q96SL4 187 aaPredicted RBP2.33□□□□□ -2.04
PMS1-215ENST00000447232 COPS4Q9BT78 406 aa2.33□□□□□ -2.04
PMS1-215ENST00000447232 SCRT1Q9BWW7 348 aa2.33□□□□□ -2.04
PMS1-215ENST00000447232 POLR2J2Q9GZM3 115 aaKnown RBP2.33□□□□□ -2.04
PMS1-215ENST00000447232 CHST6Q9GZX3 395 aa2.33□□□□□ -2.04
PMS1-215ENST00000447232 POLR2J3Q9H1A7 115 aaKnown RBP2.33□□□□□ -2.04
PMS1-215ENST00000447232 RGCCQ9H4X1 137 aa2.33□□□□□ -2.04
PMS1-215ENST00000447232 MAP6D1Q9H9H5 199 aa2.33□□□□□ -2.04
PMS1-215ENST00000447232 PNPOQ9NVS9 261 aa2.33□□□□□ -2.04
PMS1-215ENST00000447232 AIG1Q9NVV5 245 aa2.33□□□□□ -2.04
PMS1-215ENST00000447232 TECRQ9NZ01 308 aaKnown RBP2.33□□□□□ -2.04
PMS1-215ENST00000447232 CNOT2Q9NZN8 540 aaKnown RBP2.33□□□□□ -2.04
PMS1-215ENST00000447232 PEMTQ9UBM1 199 aa2.33□□□□□ -2.04
PMS1-215ENST00000447232 RIMS3Q9UJD0 308 aa2.33□□□□□ -2.04
PMS1-215ENST00000447232 PSG11Q9UQ72 335 aa2.33□□□□□ -2.04
PMS1-215ENST00000447232 NUBP2Q9Y5Y2 271 aa2.33□□□□□ -2.04
PMS1-215ENST00000447232 NBDYA0A0U1RRE5 68 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 CDC42EP2O14613 210 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 GAPDHP04406 335 aaKnown RBP2.32□□□□□ -2.04
PMS1-215ENST00000447232 CGB3P0DN86 165 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 CGB7P0DN87 165 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 OR3A1P47881 315 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 KRTAP10-1P60331 282 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 TATDN3Q17R31 274 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 LRRC36Q1X8D7 754 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 CEP78Q5JTW2 689 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 MSANTD1Q6ZTZ1 278 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 MSRB3Q8IXL7 192 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 TMEM61Q8N0U2 210 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 BATF2Q8N1L9 274 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 Q8NAQ8 132 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 OR4D6Q8NGJ1 314 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 OR11H2Q8NH07 326 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 RASSF5Q8WWW0 418 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 MS4A10Q96PG2 267 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 HIST1H2AAQ96QV6 131 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 ZNF355PQ9NSJ1 428 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 THAP1Q9NVV9 213 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 SLC25A37Q9NYZ2 338 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 POLDIP2Q9Y2S7 368 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 U3KQV3 271 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 DEFB131BA0A096LNP1 70 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 A0A0B4J203 849 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 ZNF729A6NN14 1252 aaPredicted RBP2.32□□□□□ -2.04
PMS1-215ENST00000447232 F8VVB4 439 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 F8VWA3 439 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 M0QX08 132 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 TRBV12-3P01733 135 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 LBPP18428 481 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 EDN2P20800 178 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 ALDH3A1P30838 453 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 VHLP40337 213 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 PTGFRP43088 359 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 HAAOP46952 286 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 REG1BP48304 166 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 CX3CR1P49238 355 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 CRYBA2P53672 197 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 TAS2R41P59536 307 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 CBX1P83916 185 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 PRKCDQ05655 676 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 PIN1Q13526 163 aaPredicted RBP2.32□□□□□ -2.04
PMS1-215ENST00000447232 LCN1P1Q5VSP4 162 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 FAM57BQ71RH2 274 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 DCXRQ7Z4W1 244 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 CCDC63Q8NA47 563 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 OR13C5Q8NGS8 318 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 DYNLRB2Q8TF09 96 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 GTF2H4Q92759 462 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 LEAP2Q969E1 77 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 SLAMF6Q96DU3 332 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 PPP1R36Q96LQ0 422 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 CST11Q9H112 138 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 LINC00574Q9H8X3 128 aa2.32□□□□□ -2.04
PMS1-215ENST00000447232 A0A087WUV0 522 aaPredicted RBP2.31□□□□□ -2.04
PMS1-215ENST00000447232 KBTBD11-OT1A0A1B0GTJ5 212 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 EFCAB9A8MZ26 197 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 ZNF878C9JN71 531 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 F5H697 171 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 BMPR1BO00238 502 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 RENP00797 406 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 IGHV3-7P01780 117 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 TRGV3P03979 118 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 ANXA2P07355 339 aaKnown RBP2.31□□□□□ -2.04
PMS1-215ENST00000447232 FOLR2P14207 255 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 GPX2P18283 190 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 NFYBP25208 207 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 ZNF121P58317 390 aaPredicted RBP2.31□□□□□ -2.04
PMS1-215ENST00000447232 FAM3BP58499 235 aaPredicted RBP2.31□□□□□ -2.04
PMS1-215ENST00000447232 FXYD6P3P58550 94 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 GRB2P62993 217 aaKnown RBP2.31□□□□□ -2.04
PMS1-215ENST00000447232 RPEL1Q2QD12 228 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 ANKRD55Q3KP44 614 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms