RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 ATP6V1G1O75348 118 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 PPYP01298 95 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 IGHV3-43DP0DP04 118 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 IRF2P14316 349 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 EGR1P18146 543 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 KIR2DS4P43632 304 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 KIR2DS1Q14954 304 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 CDSNQ15517 529 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 COQ8AQ8NI60 647 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 Q9N2K0 584 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 ZC4H2Q9NQZ6 224 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 DECR2Q9NUI1 292 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 OR1A1Q9P1Q5 309 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 PPP1R3CQ9UQK1 317 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 TUBAL3A6NHL2 446 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 MPTX1A8MV57 137 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 DEFB108AA8MXU0 73 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 L7N2F9 121 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 SELLP14151 372 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 IL2RGP31785 369 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 TLE1Q04724 770 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 TMEM185AQ8NFB2 350 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 TMEM230Q96A57 120 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 OPN4Q9UHM6 478 aa12.71□□□□□ -0.37
CPSF7-205ENST00000439958 ERRFI1Q9UJM3 462 aaPredicted RBP12.71□□□□□ -0.37
CPSF7-205ENST00000439958 ZNF462Q96JM2 2506 aa12.71□□□□□ -0.38
CPSF7-205ENST00000439958 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.71□□□□□ -0.38
CPSF7-205ENST00000439958 GIPP09681 153 aaPredicted RBP12.71□□□□□ -0.38
CPSF7-205ENST00000439958 RPA2P15927 270 aa12.71□□□□□ -0.38
CPSF7-205ENST00000439958 UQCRFS1P47985 274 aa12.71□□□□□ -0.38
CPSF7-205ENST00000439958 FAM76BQ5HYJ3 339 aa12.71□□□□□ -0.38
CPSF7-205ENST00000439958 SLC7A5P1Q8MH63 180 aa12.71□□□□□ -0.38
CPSF7-205ENST00000439958 MEGF10Q96KG7 1140 aa12.71□□□□□ -0.38
CPSF7-205ENST00000439958 TAF9BQ9HBM6 251 aa12.71□□□□□ -0.38
CPSF7-205ENST00000439958 KCNIP1Q9NZI2 227 aa12.71□□□□□ -0.38
CPSF7-205ENST00000439958 KCNIP3Q9Y2W7 256 aa12.71□□□□□ -0.38
CPSF7-205ENST00000439958 H3BUI4 141 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 PLAUP00749 431 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 CHRNB4P30926 498 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 OR3A1P47881 315 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 MZT1Q08AG7 82 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 FAM53AQ6NSI3 398 aaPredicted RBP12.7□□□□□ -0.38
CPSF7-205ENST00000439958 ACP7Q6ZNF0 438 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 OR10V1Q8NGI7 309 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 MRPL30Q8TCC3 161 aaKnown RBP12.7□□□□□ -0.38
CPSF7-205ENST00000439958 USB1Q9BQ65 265 aaKnown RBP12.7□□□□□ -0.38
CPSF7-205ENST00000439958 ARL6Q9H0F7 186 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 KCNJ16Q9NPI9 418 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 LRRK2Q5S007 2527 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 USP24Q9UPU5 2620 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 VSTM5A8MXK1 200 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 TRDCB7Z8K6 153 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 NXPH3O95157 252 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 OR5AC1P0C628 307 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 OMGP23515 440 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 IL13RA2Q14627 380 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 ANKRD55Q3KP44 614 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 GSG1LQ6UXU4 331 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 C11orf53Q8IXP5 236 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 RNASE11Q8TAA1 199 aaKnown RBP12.7□□□□□ -0.38
CPSF7-205ENST00000439958 ZFAND1Q8TCF1 268 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 PPP1R1CQ8WVI7 109 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 SLC2A9Q9NRM0 540 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 PIPOXQ9P0Z9 390 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 IFNA2P01563 188 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 OR8U9P0C7N5 309 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 PPP3CBP16298 524 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 GLIPR1P48060 266 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 NKX6-1P78426 367 aaPredicted RBP12.7□□□□□ -0.38
CPSF7-205ENST00000439958 KRBOX4Q5JUW0 171 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 POC1AQ8NBT0 407 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 ST6GALNAC3Q8NDV1 305 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 OR8U1Q8NH10 309 aa12.7□□□□□ -0.38
CPSF7-205ENST00000439958 UBE2J1Q9Y385 318 aaPredicted RBP12.7□□□□□ -0.38
CPSF7-205ENST00000439958 FLNCQ14315 2725 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 M0R233 179 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 ZG16O60844 167 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 DUS4LO95620 317 aaKnown RBP12.69□□□□□ -0.38
CPSF7-205ENST00000439958 ZNF250P15622 560 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 SPICQ8N5J4 248 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 MITD1Q8WV92 249 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 MRPL24Q96A35 216 aaKnown RBP12.69□□□□□ -0.38
CPSF7-205ENST00000439958 PIK3IP1Q96FE7 263 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 ALX4Q9H161 411 aaPredicted RBP12.69□□□□□ -0.38
CPSF7-205ENST00000439958 FAM90A10PA6NDY2 464 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 FAM90A18PA6NE21 464 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 FAM90A16PA6NEW6 464 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 FAM90A20PA6NIJ5 464 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 FAM90A8PA6NJQ4 464 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 FAM90A7PA6NKC0 464 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 FAM90A22PA8MWA6 464 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 FAM90A12PA8MX19 464 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 FAM90A5PA8MXJ8 464 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 FAM90A23PA8MXZ1 464 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 CA11O75493 328 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 FAM90A15PP0C7V4 464 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 FAM90A13PP0C7W8 464 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 FAM90A14PP0C7W9 464 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 FAM90A24PP0C7X0 464 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 Q6P435 159 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms