RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 IP6K3Q96PC2 410 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 ZPBPQ9BS86 351 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 RTBDNQ9BSG5 229 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-205ENST00000438362 ANGPTL4Q9BY76 406 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 TMEM222Q9H0R3 208 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 ZDBF2Q9HCK1 2354 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 CACNA1DQ01668 2161 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 ELOA3CA0A087WX78 387 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-205ENST00000438362 PQLC2LA1A4F0 135 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 SLC22A20A6NK97 555 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 F8VVB4 439 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 F8VWA3 439 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 H0YIZ8 118 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 FGF16O43320 207 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 SLC25A6P12236 298 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 PPP1CCP36873 323 aaKnown RBP5.81□□□□□ -1.48
CSDE1-205ENST00000438362 ZNF90Q03938 601 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 RNPS1Q15287 305 aaKnown RBP5.81□□□□□ -1.48
CSDE1-205ENST00000438362 OR1C1Q15619 314 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 FFAR4Q5NUL3 377 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 SMIM8Q96KF7 97 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 KLHDC3Q9BQ90 382 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 DUSP15Q9H1R2 295 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-205ENST00000438362 SLC25A22Q9H936 323 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 FSCN3Q9NQT6 498 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 ZMAT5Q9UDW3 170 aaKnown RBP5.81□□□□□ -1.48
CSDE1-205ENST00000438362 OR2W1Q9Y3N9 320 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 PLXNA4Q9HCM2 1894 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 CACNA1EQ15878 2313 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 A0A1B0GU03 582 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 F6UZH7 168 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 HEXAP06865 529 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 UBE2G2P60604 165 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 RPS16P62249 146 aaKnown RBP5.81□□□□□ -1.48
CSDE1-205ENST00000438362 TMEM187Q14656 261 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 SSPNQ14714 243 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 BSXQ3C1V8 233 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 C9orf152Q5JTZ5 239 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 STPG1Q5TH74 334 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 CYB561D1Q8N8Q1 229 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 OR5A2Q8NGI9 324 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 OR52M1Q8NGK5 317 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 ESRP2Q9H6T0 727 aaKnown RBP5.81□□□□□ -1.48
CSDE1-205ENST00000438362 PLA2G3Q9NZ20 509 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 VAX2Q9UIW0 290 aa5.81□□□□□ -1.48
CSDE1-205ENST00000438362 LDLRAD4O15165 306 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 RRP8O43159 456 aaKnown RBP5.8□□□□□ -1.48
CSDE1-205ENST00000438362 EIF3GO75821 320 aaKnown RBP eCLIP5.8□□□□□ -1.48
CSDE1-205ENST00000438362 IGLV3-19P01714 112 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 RPS2P15880 293 aaKnown RBP5.8□□□□□ -1.48
CSDE1-205ENST00000438362 SPINK2P20155 84 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 GALR1P47211 349 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 FHITP49789 147 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 FABP6P51161 128 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 MLF1P58340 268 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 CXorf66Q5JRM2 361 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-205ENST00000438362 ZNF468Q5VIY5 522 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-205ENST00000438362 C17orf78Q8N4C9 275 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 MRGPRFQ96AM1 343 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 TMEM68Q96MH6 324 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 SPSB2Q99619 263 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 TM2D1Q9BX74 207 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 MRPL13Q9BYD1 178 aaKnown RBP5.8□□□□□ -1.48
CSDE1-205ENST00000438362 PLXNA2O75051 1894 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 G3V3Q6 166 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 YIF1AO95070 293 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 MMP9P14780 707 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 PAX6P26367 422 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 PPP1CBP62140 327 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 TLE1Q04724 770 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 ATP6V1FQ16864 119 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 SMIM21Q3B7S5 101 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 C10orf128Q5T292 105 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-205ENST00000438362 MRGPRGQ86SM5 289 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 UBALD2Q8IYN6 164 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 OR10G4Q8NGN3 311 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 OR10G9Q8NGN4 311 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 OR10G7Q8NGN6 311 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 OR4A4PQ8NGN8 299 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 TMEM147Q9BVK8 224 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 TMEM9BQ9NQ34 198 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 NAT8Q9UHE5 227 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 F2RP25116 425 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 THBS3P49746 956 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 SUCLG1P53597 346 aaKnown RBP5.8□□□□□ -1.48
CSDE1-205ENST00000438362 ZNF718Q3SXZ3 478 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 SPINK14Q6IE38 97 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 BTNL8Q6UX41 500 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 TUSC5Q8IXB3 177 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 H1FOOQ8IZA3 346 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-205ENST00000438362 TMEM230Q96A57 120 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 GALNT14Q96FL9 552 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 ABHD14BQ96IU4 210 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 TAAR9Q96RI9 348 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 SH3BGRL3Q9H299 93 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 PRO1933Q9H354 126 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 TCFL5Q9UL49 500 aa5.8□□□□□ -1.48
CSDE1-205ENST00000438362 SNRNP200O75643 2136 aaKnown RBP5.8□□□□□ -1.48
CSDE1-205ENST00000438362 NOTCH4Q99466 2003 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms