RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 ZNF717Q9BY31 904 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P31-201ENST00000437242 TM6SF2Q9BZW4 377 aa1.5□□□□□ -2.17
HMGB1P31-201ENST00000437242 PARVGQ9HBI0 331 aa1.5□□□□□ -2.17
HMGB1P31-201ENST00000437242 RRAGDQ9NQL2 400 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P31-201ENST00000437242 ZC4H2Q9NQZ6 224 aa1.5□□□□□ -2.17
HMGB1P31-201ENST00000437242 AGPAT3Q9NRZ7 376 aa1.5□□□□□ -2.17
HMGB1P31-201ENST00000437242 MCUBQ9NWR8 336 aa1.5□□□□□ -2.17
HMGB1P31-201ENST00000437242 RHBDL2Q9NX52 303 aa1.5□□□□□ -2.17
HMGB1P31-201ENST00000437242 MARCOQ9UEW3 520 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P31-201ENST00000437242 BTRCQ9Y297 605 aa1.5□□□□□ -2.17
HMGB1P31-201ENST00000437242 YARS2Q9Y2Z4 477 aaKnown RBP1.5□□□□□ -2.17
HMGB1P31-201ENST00000437242 CBY1Q9Y3M2 126 aa1.5□□□□□ -2.17
HMGB1P31-201ENST00000437242 NBEAL2Q6ZNJ1 2754 aa1.5□□□□□ -2.17
HMGB1P31-201ENST00000437242 EML6Q6ZMW3 1958 aa1.5□□□□□ -2.17
HMGB1P31-201ENST00000437242 TENM1Q9UKZ4 2725 aa1.5□□□□□ -2.17
HMGB1P31-201ENST00000437242 DYSFO75923 2080 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 HEATR5AQ86XA9 2040 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 IGHV3-49A0A0A0MS15 119 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 OR5H1A6NKK0 313 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 C17orf51A8MQB3 221 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 SUPT3HB4E1H0 165 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 TEX46H3BTG2 121 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 RPL36A-HNRNPH2H7BZ11 118 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 PLIN3O60664 434 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 SOD1P00441 154 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 ASS1P00966 412 aaKnown RBP1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 IGLV3-25P01717 112 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 HLA-DRAP01903 254 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 IGKV4-1P06312 121 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 KRT16P08779 473 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 STAG3L3P0CL85 134 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 RALBP11234 206 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 COX6B1P14854 86 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 CD82P27701 267 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 PSMB5P28074 263 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 ANP32AP39687 249 aaKnown RBP1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 MYCNOSP40205 109 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 SLC1A2P43004 574 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 ERFP50548 548 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 AP1S2P56377 157 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 CLDN8P56748 225 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 TAS2R39P59534 338 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 TAS2R46P59540 309 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 UBE2MP61081 183 aaKnown RBP1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 RPS15AP62244 130 aaKnown RBP1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 RAB11AP62491 216 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 ZNF616Q08AN1 781 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 INCA1Q0VD86 236 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 ZNF266Q14584 549 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 IHHQ14623 411 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 RBMY1FQ15415 496 aaKnown RBP1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 RAB11BQ15907 218 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 HADHQ16836 314 aaKnown RBP1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 KRTAP13-2Q52LG2 175 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 YIF1BQ5BJH7 314 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 FAM222AQ5U5X8 452 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 SLC25A34Q6PIV7 304 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 FAM122BQ7Z309 247 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 OSR2Q8N2R0 312 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 ST6GALNAC3Q8NDV1 305 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 OR4M1Q8NGD0 313 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 OR5AR1Q8NGP9 310 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 OR52P1PQ8NH57 321 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 OR51F2Q8NH61 342 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 ENKURQ8TC29 256 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 RAB1CQ92928 201 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 CATSPER2Q96P56 530 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 EMC6Q9BV81 110 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 ULBP3Q9BZM4 244 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 BLZF1Q9H2G9 400 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 FBXO44Q9H4M3 255 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 TREX1Q9NSU2 369 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 AHSPQ9NZD4 102 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 PEF1Q9UBV8 284 aaKnown RBP1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 PSME2Q9UL46 239 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 SCML1Q9UN30 329 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 SIGLEC9Q9Y336 463 aa1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 INTS1Q8N201 2190 aaKnown RBP1.49□□□□□ -2.17
HMGB1P31-201ENST00000437242 YLPM1P49750 1951 aaKnown RBP1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 DYNC2H1Q8NCM8 4307 aaKnown RBP1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 SMIM26A0A096LP01 95 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 IGHV1-3A0A0C4DH29 117 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 C5orf63A6NC05 138 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 TLCD2A6NGC4 264 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 NCF1BA6NI72 391 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 ZNF233A6NK53 670 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 NCF1CA8MVU1 366 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 NDUFC2-KCTD14E9PQ53 114 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 HSBP1O75506 76 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 GATBO75879 557 aaKnown RBP1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 FARS2O95363 451 aaKnown RBP1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 CYB5R3P00387 301 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 HLA-DQB1P01920 261 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 MT-ND4P03905 459 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 CTSEP14091 401 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 CELP19835 753 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 LOXP28300 417 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 KIR3DL2P43630 455 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 GPR1P46091 355 aa1.48□□□□□ -2.17
HMGB1P31-201ENST00000437242 GCLMP48507 274 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms