RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 FUT6P51993 359 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 POM121Q96HA1 1249 aa9.26□□□□□ -0.93
TCOF1-204ENST00000427724 OR3A4PP47883 348 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 ATPAF1Q5TC12 328 aaPredicted RBP9.25□□□□□ -0.93
TCOF1-204ENST00000427724 IL34Q6ZMJ4 242 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 ASB10Q8WXI3 467 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 RHOVQ96L33 236 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 NIPSNAP3BQ9BS92 247 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 OR2H1Q9GZK4 316 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 CXXC4Q9H2H0 198 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 CNTD2Q9H8S5 307 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 GATCO43716 136 aaKnown RBP9.25□□□□□ -0.93
TCOF1-204ENST00000427724 ZNF728P0DKX0 622 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 CD37P11049 281 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 FCGR2CP31995 323 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 SUCLG1P53597 346 aaKnown RBP9.25□□□□□ -0.93
TCOF1-204ENST00000427724 SSBP1Q04837 148 aaKnown RBP9.25□□□□□ -0.93
TCOF1-204ENST00000427724 HAGHQ16775 308 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 AWAT1Q58HT5 328 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 Q6ZS92 163 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 ZNF383Q8NA42 475 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 OR51H1Q8NH63 302 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 RGP1Q92546 391 aaPredicted RBP9.25□□□□□ -0.93
TCOF1-204ENST00000427724 SEH1LQ96EE3 360 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 PHYHIPLQ96FC7 376 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 SPOCK3Q9BQ16 436 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 SRXN1Q9BYN0 137 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 PPIAL4EA0A075B759 164 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 A0A087WV48 116 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 PROB1E7EW31 1015 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 PPIAL4DF5H284 164 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 PPIAL4FP0DN26 164 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 KIR3DL2P43630 455 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 GPR12P47775 334 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 RPS4XP62701 263 aaKnown RBP9.25□□□□□ -0.93
TCOF1-204ENST00000427724 MPPED2Q15777 294 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 PRAMEF6Q5VXH4 476 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 OR5M8Q8NGP6 311 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 ELOVL5Q9NYP7 299 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 PRR13Q9NZ81 148 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 PPIAL4AQ9Y536 164 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 POLQO75417 2590 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 A0A087X0M5 115 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 A0A1B0GX30 115 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 F2RL2O00254 374 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 NXPH3O95157 252 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 UCP2P55851 309 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 OR10J5Q8NHC4 309 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 DPF1Q92782 380 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 CTHRC1Q96CG8 243 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 SPIN2AQ99865 258 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 SPIN2BQ9BPZ2 258 aa9.25□□□□□ -0.93
TCOF1-204ENST00000427724 PHF1O43189 567 aaPredicted RBP9.24□□□□□ -0.93
TCOF1-204ENST00000427724 MRPS34P82930 218 aaKnown RBP9.24□□□□□ -0.93
TCOF1-204ENST00000427724 MGAT2Q10469 447 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 NFAM1Q8NET5 270 aaPredicted RBP9.24□□□□□ -0.93
TCOF1-204ENST00000427724 SEC11CQ9BY50 192 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 OR51M1Q9H341 326 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 GAB2Q9UQC2 676 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 STARD10Q9Y365 291 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 SHANK1Q9Y566 2161 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 TLN2Q9Y4G6 2542 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 CHD7Q9P2D1 2997 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 DOPEY1Q5JWR5 2465 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 SCN8AQ9UQD0 1980 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 IGHV3OR16-10A0A075B7F0 116 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.24□□□□□ -0.93
TCOF1-204ENST00000427724 MIDNQ504T8 468 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 TMEM182Q6ZP80 229 aaPredicted RBP9.24□□□□□ -0.93
TCOF1-204ENST00000427724 PRSS35Q8N3Z0 413 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 C15orf54Q8N8G6 183 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 MITD1Q8WV92 249 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 SLC17A5Q9NRA2 495 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 RYDENQ9NUL5 291 aaKnown RBP9.24□□□□□ -0.93
TCOF1-204ENST00000427724 hADV38S2A0JD32 116 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 C7orf77A4D0Y5 90 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 MPTX1A8MV57 137 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 RPL12P30050 165 aaKnown RBP9.24□□□□□ -0.93
TCOF1-204ENST00000427724 IGLV3-21P80748 117 aaPredicted RBP9.24□□□□□ -0.93
TCOF1-204ENST00000427724 CLEC12BQ2HXU8 276 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 LINC01590Q5TEZ4 76 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 RTL6Q6ICC9 239 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 Q6ZT83 130 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 OR10V1Q8NGI7 309 aa9.24□□□□□ -0.93
TCOF1-204ENST00000427724 ZNF2Q9BSG1 426 aaPredicted RBP9.24□□□□□ -0.93
TCOF1-204ENST00000427724 IGHV3OR15-7A0A075B7D8 119 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 KIR2DS1A0A191URI9 304 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 C9orf170A2RU37 121 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 DEFB108AA8MXU0 73 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 E9PQ18 207 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 ADAP1O75689 374 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 CST2P09228 141 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 KIR2DS4P43632 304 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 SCAND1P57086 179 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 KIR2DS1Q14954 304 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 GUK1Q16774 197 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 DOLPP1Q86YN1 238 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 LILRB2Q8N423 598 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 PP6455Q8WZ26 134 aa9.23□□□□□ -0.93
TCOF1-204ENST00000427724 A0A0U1RQK1 487 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms