RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 MPC2O95563 127 aa17.64■□□□□ 0.41
GPC1-202ENST00000420138 GATA4P43694 442 aa17.64■□□□□ 0.41
GPC1-202ENST00000420138 SRSF4Q08170 494 aaKnown RBP17.64■□□□□ 0.41
GPC1-202ENST00000420138 BAMBIQ13145 260 aa17.64■□□□□ 0.41
GPC1-202ENST00000420138 PAN3Q58A45 887 aaKnown RBP17.64■□□□□ 0.41
GPC1-202ENST00000420138 IGSF11Q5DX21 431 aa17.64■□□□□ 0.41
GPC1-202ENST00000420138 LIN54Q6MZP7 749 aa17.64■□□□□ 0.41
GPC1-202ENST00000420138 TMEM185AQ8NFB2 350 aa17.64■□□□□ 0.41
GPC1-202ENST00000420138 ITLN1Q8WWA0 313 aa17.64■□□□□ 0.41
GPC1-202ENST00000420138 TREM2Q9NZC2 230 aa17.64■□□□□ 0.41
GPC1-202ENST00000420138 HCFC1P51610 2035 aa17.64■□□□□ 0.41
GPC1-202ENST00000420138 EPG5Q9HCE0 2579 aa17.64■□□□□ 0.41
GPC1-202ENST00000420138 SRRM5B3KS81 715 aa17.63■□□□□ 0.41
GPC1-202ENST00000420138 KNG1P01042 644 aa17.63■□□□□ 0.41
GPC1-202ENST00000420138 IFNA7P01567 189 aa17.63■□□□□ 0.41
GPC1-202ENST00000420138 SCTP09683 121 aa17.63■□□□□ 0.41
GPC1-202ENST00000420138 AKR1C4P17516 323 aa17.63■□□□□ 0.41
GPC1-202ENST00000420138 HLA-GP17693 338 aa17.63■□□□□ 0.41
GPC1-202ENST00000420138 GCSAMQ8N6F7 178 aa17.63■□□□□ 0.41
GPC1-202ENST00000420138 OR10Z1Q8NGY1 313 aa17.63■□□□□ 0.41
GPC1-202ENST00000420138 PLPPR2Q96GM1 343 aa17.63■□□□□ 0.41
GPC1-202ENST00000420138 PHB2Q99623 299 aa17.63■□□□□ 0.41
GPC1-202ENST00000420138 ESRP2Q9H6T0 727 aaKnown RBP17.63■□□□□ 0.41
GPC1-202ENST00000420138 OR14J1Q9UGF5 321 aa17.63■□□□□ 0.41
GPC1-202ENST00000420138 PI3P19957 117 aa17.63■□□□□ 0.41
GPC1-202ENST00000420138 SORDQ00796 357 aa17.63■□□□□ 0.41
GPC1-202ENST00000420138 TFF3Q07654 80 aa17.63■□□□□ 0.41
GPC1-202ENST00000420138 HERPUD1Q15011 391 aa17.63■□□□□ 0.41
GPC1-202ENST00000420138 SURF2Q15527 256 aaPredicted RBP17.63■□□□□ 0.41
GPC1-202ENST00000420138 ZNF497Q6ZNH5 498 aa17.63■□□□□ 0.41
GPC1-202ENST00000420138 IGKV1-6A0A0C4DH72 117 aa17.62■□□□□ 0.41
GPC1-202ENST00000420138 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.62■□□□□ 0.41
GPC1-202ENST00000420138 LHBP01229 141 aa17.62■□□□□ 0.41
GPC1-202ENST00000420138 TFF1P04155 84 aa17.62■□□□□ 0.41
GPC1-202ENST00000420138 FIP1L1Q6UN15 594 aaKnown RBP17.62■□□□□ 0.41
GPC1-202ENST00000420138 MOGAT3Q86VF5 341 aa17.62■□□□□ 0.41
GPC1-202ENST00000420138 NEUROG1Q92886 237 aa17.62■□□□□ 0.41
GPC1-202ENST00000420138 IL19Q9UHD0 177 aa17.62■□□□□ 0.41
GPC1-202ENST00000420138 ZDHHC8Q9ULC8 765 aa17.62■□□□□ 0.41
GPC1-202ENST00000420138 CFAP46Q8IYW2 2715 aa17.62■□□□□ 0.41
GPC1-202ENST00000420138 FXYD6-FXYD2A0A087WZ82 144 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 RFPL4AA6NLU0 287 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 TRDCB7Z8K6 153 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 E7EQL1 145 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 RFPL4AL1F8VTS6 287 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 ARPC5O15511 151 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 SIAH2O43255 324 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 DUS4LO95620 317 aaKnown RBP17.61■□□□□ 0.41
GPC1-202ENST00000420138 CD8AP01732 235 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 RCC1P18754 421 aaPredicted RBP17.61■□□□□ 0.41
GPC1-202ENST00000420138 VAMP1P23763 118 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 MDH2P40926 338 aaKnown RBP17.61■□□□□ 0.41
GPC1-202ENST00000420138 FGL1Q08830 312 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 ZNF843Q8N446 348 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 FXYD6Q9H0Q3 95 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 RASL12Q9NYN1 266 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 NDRG3Q9UGV2 375 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 METRNQ9UJH8 293 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 ANKRD34BA5PLL1 514 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 ZG16O60844 167 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 ADH4P08319 380 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 RPS2P15880 293 aaKnown RBP17.61■□□□□ 0.41
GPC1-202ENST00000420138 FCGR2CP31995 323 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 SUPT4H1P63272 117 aaKnown RBP17.61■□□□□ 0.41
GPC1-202ENST00000420138 TNFAIP6P98066 277 aaPredicted RBP17.61■□□□□ 0.41
GPC1-202ENST00000420138 SMIM21Q3B7S5 101 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 TMEM128Q5BJH2 165 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 GCM1Q9NP62 436 aa17.61■□□□□ 0.41
GPC1-202ENST00000420138 EXOSC2Q13868 293 aaKnown RBP17.6■□□□□ 0.41
GPC1-202ENST00000420138 ATXN7L3Q14CW9 347 aaPredicted RBP17.6■□□□□ 0.41
GPC1-202ENST00000420138 C6orf183Q5T699 404 aa17.6■□□□□ 0.41
GPC1-202ENST00000420138 OR8H3Q8N146 312 aa17.6■□□□□ 0.41
GPC1-202ENST00000420138 CD177Q8N6Q3 437 aa17.6■□□□□ 0.41
GPC1-202ENST00000420138 UBQLN2Q9UHD9 624 aa17.6■□□□□ 0.41
GPC1-202ENST00000420138 PLCE1Q9P212 2302 aa17.6■□□□□ 0.41
GPC1-202ENST00000420138 KIR2DS1A0A191URI9 304 aa17.59■□□□□ 0.41
GPC1-202ENST00000420138 POM121CA8CG34 1229 aa17.59■□□□□ 0.41
GPC1-202ENST00000420138 IFNL4K9M1U5 179 aa17.59■□□□□ 0.41
GPC1-202ENST00000420138 S100A11P31949 105 aa17.59■□□□□ 0.41
GPC1-202ENST00000420138 ECI1P42126 302 aa17.59■□□□□ 0.41
GPC1-202ENST00000420138 KIR2DS4P43632 304 aa17.59■□□□□ 0.41
GPC1-202ENST00000420138 KIR2DS1Q14954 304 aa17.59■□□□□ 0.41
GPC1-202ENST00000420138 TMUB2Q71RG4 321 aa17.59■□□□□ 0.41
GPC1-202ENST00000420138 CASTOR1Q8WTX7 329 aa17.59■□□□□ 0.41
GPC1-202ENST00000420138 DHRS9Q9BPW9 319 aa17.59■□□□□ 0.41
GPC1-202ENST00000420138 PDCD10Q9BUL8 212 aa17.59■□□□□ 0.41
GPC1-202ENST00000420138 GLS2Q9UI32 602 aa17.59■□□□□ 0.41
GPC1-202ENST00000420138 MAB21L2Q9Y586 359 aa17.59■□□□□ 0.41
GPC1-202ENST00000420138 TRAV14DV4A0A0A6YYC5 116 aa17.58■□□□□ 0.41
GPC1-202ENST00000420138 C17orf100A8MU93 164 aa17.58■□□□□ 0.41
GPC1-202ENST00000420138 CD55P08174 381 aa17.58■□□□□ 0.41
GPC1-202ENST00000420138 PSG2P11465 335 aa17.58■□□□□ 0.41
GPC1-202ENST00000420138 SERPINF1P36955 418 aa17.58■□□□□ 0.41
GPC1-202ENST00000420138 FAM90A1Q86YD7 464 aa17.58■□□□□ 0.41
GPC1-202ENST00000420138 OR5T2Q8NGG2 359 aa17.58■□□□□ 0.41
GPC1-202ENST00000420138 MOB3AQ96BX8 217 aa17.58■□□□□ 0.41
GPC1-202ENST00000420138 MBNL3Q9NUK0 354 aaKnown RBP17.58■□□□□ 0.41
GPC1-202ENST00000420138 WIPI2Q9Y4P8 454 aa17.58■□□□□ 0.41
GPC1-202ENST00000420138 IGKV1D-17A0A075B6S4 117 aa17.58■□□□□ 0.4
GPC1-202ENST00000420138 TRAV39A0A0B4J263 110 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms