RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 RBM38Q9H0Z9 239 aaKnown RBP15.06■□□□□ 0
PHRF1-202ENST00000413872 NINQ8N4C6 2090 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 FAM157AC9JC47 383 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 LSM11P83369 360 aaKnown RBP eCLIP15.06■□□□□ 03e-6■□□□□ 9.5
PHRF1-202ENST00000413872 FAM219AQ8IW50 185 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 DNASE2O00115 360 aaPredicted RBP15.06■□□□□ 0
PHRF1-202ENST00000413872 SEMA7AO75326 666 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 IGKV3-11P04433 115 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 SLC6A1P30531 599 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 H3F3AP84243 136 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 CDCP2Q5VXM1 449 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 OR5R1Q8NH85 324 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 GAR1Q9NY12 217 aaKnown RBP15.06■□□□□ 0
PHRF1-202ENST00000413872 TREM2Q9NZC2 230 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 IL19Q9UHD0 177 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 LOC101059948A0A1B0GTJ6 334 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 A0A1W2PRD5 423 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 A0A1W2PRF3 423 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 A0A1W2PRM7 423 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 PRR19A6NJB7 356 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 NPIPB13A6NJU9 1138 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 NPIPB4C9JG80 1138 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 SF3B6Q9Y3B4 125 aaKnown RBP15.06■□□□□ 0
PHRF1-202ENST00000413872 G3V3Q6 166 aa15.05■□□□□ 0
PHRF1-202ENST00000413872 TRIM77I1YAP6 450 aa15.05■□□□□ 0
PHRF1-202ENST00000413872 PHYHIPLQ96FC7 376 aa15.05■□□□□ 0
PHRF1-202ENST00000413872 RHOFQ9HBH0 211 aa15.05■□□□□ 0
PHRF1-202ENST00000413872 ZMIZ1Q9ULJ6 1067 aa15.05■□□□□ 0
PHRF1-202ENST00000413872 P2RY1P47900 373 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 Q9N2K0 584 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 COA4Q9NYJ1 87 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 DUXBA0A1W2PPF3 345 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 FAM24AA6NFZ4 105 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 MS4A18H0YCH9 400 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 CDS2O95674 445 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 CDC34P49427 236 aaPredicted RBP15.05■□□□□ -0
PHRF1-202ENST00000413872 MS4A18Q3C1V0 323 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 GAPTQ8N292 157 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 VWCEQ96DN2 955 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 MAP1LC3B2A6NCE7 125 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 FAM90A10PA6NDY2 464 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 FAM90A18PA6NE21 464 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 FAM90A16PA6NEW6 464 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 FAM90A20PA6NIJ5 464 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 FAM90A8PA6NJQ4 464 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 FAM90A7PA6NKC0 464 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 FAM90A22PA8MWA6 464 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 FAM90A12PA8MX19 464 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 FAM90A5PA8MXJ8 464 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 FAM90A23PA8MXZ1 464 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 FAM90A15PP0C7V4 464 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 FAM90A13PP0C7W8 464 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 FAM90A14PP0C7W9 464 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 FAM90A24PP0C7X0 464 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 SPP1P10451 314 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 PIGYQ3MUY2 71 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 ZCCHC14Q8WYQ9 949 aaKnown RBP15.05■□□□□ -0
PHRF1-202ENST00000413872 HARBI1Q96MB7 349 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 MAP1LC3BQ9GZQ8 125 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 TMEM231Q9H6L2 316 aa15.05■□□□□ -0
PHRF1-202ENST00000413872 HMSDA8MTL9 139 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 C4orf51C9J302 202 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 J3QW42 95 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 IGHV3-13P01766 116 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 IGHV3-7P01780 117 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 SLC25A5P05141 298 aaKnown RBP15.04■□□□□ -0
PHRF1-202ENST00000413872 PAX5Q02548 391 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 ZNF260Q3ZCT1 412 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 GCSAMQ8N6F7 178 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 ZPLD1Q8TCW7 415 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 FOXJ2Q9P0K8 574 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 DHRS7CA6NNS2 312 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 KIR3DL2P43630 455 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 HOGA1Q86XE5 327 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 SIPA1L1O43166 1804 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 GNG7O60262 68 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 IL11P20809 199 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 CCL8P80075 99 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 CLEC18BQ6UXF7 455 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 KCNK15Q9H427 330 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 CISD1Q9NZ45 108 aaKnown RBP15.04■□□□□ -0
PHRF1-202ENST00000413872 OR1A1Q9P1Q5 309 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 SYNGR1O43759 233 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 ICMTO60725 284 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 DAOP14920 347 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 CSRP3P50461 194 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 FGF12P61328 243 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 TMEM91Q6ZNR0 172 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 CRIPAKQ8N1N5 446 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 CCL28Q9NRJ3 127 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 SLC2A9Q9NRM0 540 aa15.04■□□□□ -0
PHRF1-202ENST00000413872 IGLV1-36A0A0B4J1U3 117 aa15.03■□□□□ -0
PHRF1-202ENST00000413872 ZNF205O95201 554 aa15.03■□□□□ -0
PHRF1-202ENST00000413872 CSRP1P21291 193 aaKnown RBP15.03■□□□□ -0
PHRF1-202ENST00000413872 ERVFC1-1P60608 527 aa15.03■□□□□ -0
PHRF1-202ENST00000413872 TAGLNQ01995 201 aaKnown RBP15.03■□□□□ -0
PHRF1-202ENST00000413872 ADAMTS17Q8TE56 1095 aa15.03■□□□□ -0
PHRF1-202ENST00000413872 DTD1Q8TEA8 209 aa15.03■□□□□ -0
PHRF1-202ENST00000413872 ZNRF4Q8WWF5 429 aa15.03■□□□□ -0
PHRF1-202ENST00000413872 RNF115Q9Y4L5 304 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms