RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ADAT1Q9BUB4 502 aaKnown RBP11.56□□□□□ -0.56
LIMS1-205ENST00000410093 OR2J1Q9GZK6 312 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 TMEM100Q9NV29 134 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 NSG2Q9Y328 171 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 DEDDO75618 318 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 OR5AC1P0C628 307 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 M6PRP20645 277 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 ZP3P21754 424 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 TIMP3P35625 211 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 FXYD4P59646 89 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 RAB32Q13637 225 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 ATXN7L3Q14CW9 347 aaPredicted RBP11.55□□□□□ -0.56
LIMS1-205ENST00000410093 OR8G1Q15617 311 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 ZNF718Q3SXZ3 478 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 GPR157Q5UAW9 335 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 MBNL2Q5VZF2 373 aaKnown RBP11.55□□□□□ -0.56
LIMS1-205ENST00000410093 BRICD5Q6PL45 260 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 FAM71E2Q8N5Q1 922 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 WDR31Q8NA23 367 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 SCCPDHQ8NBX0 429 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 OR1S1Q8NH92 325 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 MSI2Q96DH6 328 aaKnown RBP11.55□□□□□ -0.56
LIMS1-205ENST00000410093 KIRREL1Q96J84 757 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 TMEM56Q96MV1 263 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 USB1Q9BQ65 265 aaKnown RBP11.55□□□□□ -0.56
LIMS1-205ENST00000410093 NRIP2Q9BQI9 281 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 CABLES2Q9BTV7 478 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 REG4Q9BYZ8 158 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 CXXC4Q9H2H0 198 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 ZNF71Q9NQZ8 489 aaPredicted RBP11.55□□□□□ -0.56
LIMS1-205ENST00000410093 CRIM1Q9NZV1 1036 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 ZNF581Q9P0T4 197 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 ZNF629Q9UEG4 869 aaPredicted RBP11.55□□□□□ -0.56
LIMS1-205ENST00000410093 TMEM56-RWDD3S4R434 201 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 FASNP49327 2511 aaKnown RBP11.55□□□□□ -0.56
LIMS1-205ENST00000410093 COL6A6A6NMZ7 2263 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 C3orf85A0A1B0GTC6 90 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 A0A1B0GWJ7 208 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 FAM221AA4D161 298 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 A8MXK9 166 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 H0YIZ8 118 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 CGAP01215 116 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 GAPDHP04406 335 aaKnown RBP11.55□□□□□ -0.56
LIMS1-205ENST00000410093 FGF2P09038 288 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 HLA-DRB3P79483 266 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 Q6P435 159 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 UQCC3Q6UW78 93 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 MRPL30Q8TCC3 161 aaKnown RBP11.55□□□□□ -0.56
LIMS1-205ENST00000410093 KLF14Q8TD94 323 aaPredicted RBP11.55□□□□□ -0.56
LIMS1-205ENST00000410093 GLYATL2Q8WU03 294 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 RNF141Q8WVD5 230 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 DYRK2Q92630 601 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 TMEM222Q9H0R3 208 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 SEBOXQ9HB31 216 aaPredicted RBP11.55□□□□□ -0.56
LIMS1-205ENST00000410093 GSKIPQ9P0R6 139 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 SPEF1Q9Y4P9 236 aa11.55□□□□□ -0.56
LIMS1-205ENST00000410093 KALRNO60229 2985 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 PIEZO2Q9H5I5 2752 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 TRAV24A0A0B4J272 114 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 OR5H1A6NKK0 313 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 K7EPK0 472 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 TNFSF13O75888 250 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 JTBO76095 146 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 GCH1P30793 250 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 GNRHRP30968 328 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 PSG7Q13046 419 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 ZNF585AQ6P3V2 769 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 BHLHA15Q7RTS1 189 aaPredicted RBP11.54□□□□□ -0.56
LIMS1-205ENST00000410093 SSX8Q7RTT4 187 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 OR10J5Q8NHC4 309 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 STARD4Q96DR4 205 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 ABHD17AQ96GS6 310 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 AKR1E2Q96JD6 320 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 TAAR6Q96RI8 345 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 TLNRD1Q9H1K6 362 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 PIGMQ9H3S5 423 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 HES4Q9HCC6 221 aa11.54□□□□□ -0.56
LIMS1-205ENST00000410093 PURGQ9UJV8 347 aaKnown RBP11.54□□□□□ -0.56
LIMS1-205ENST00000410093 TEX46H3BTG2 121 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 PHF1O43189 567 aaPredicted RBP11.53□□□□□ -0.56
LIMS1-205ENST00000410093 FGF16O43320 207 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 CELA3BP08861 270 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 ZNF44P15621 663 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 LMO1P25800 156 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 S100A10P60903 97 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 PDCD1Q15116 288 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 IGSF11Q5DX21 431 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 TIMM23BQ5SRD1 257 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 C1orf185Q5T7R7 199 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 VWA1Q6PCB0 445 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 ZNF497Q6ZNH5 498 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 Q6ZPA2 131 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 STPG2Q8N412 459 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 BVESQ8NE79 360 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 PRR7Q8TB68 274 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 SAT2Q96F10 170 aaPredicted RBP11.53□□□□□ -0.56
LIMS1-205ENST00000410093 CYYR1Q96J86 154 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 SFXN3Q9BWM7 321 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 SLC5A7Q9GZV3 580 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 OR5AC2Q9NZP5 309 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms