RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 TRAV18A0A075B6X5 111 aa17■□□□□ 0.31
C4orf48-202ENST00000409860 J3QLI3 93 aa17■□□□□ 0.31
C4orf48-202ENST00000409860 MT-ND4P03905 459 aa17■□□□□ 0.31
C4orf48-202ENST00000409860 GLP1RP43220 463 aa17■□□□□ 0.31
C4orf48-202ENST00000409860 ZNF273Q14593 569 aa17■□□□□ 0.31
C4orf48-202ENST00000409860 CDNFQ49AH0 187 aa17■□□□□ 0.31
C4orf48-202ENST00000409860 TMEM69Q5SWH9 247 aa17■□□□□ 0.31
C4orf48-202ENST00000409860 FAHD2BQ6P2I3 314 aaPredicted RBP17■□□□□ 0.31
C4orf48-202ENST00000409860 KIR3DL3Q8N743 410 aa17■□□□□ 0.31
C4orf48-202ENST00000409860 FAHD2AQ96GK7 314 aa17■□□□□ 0.31
C4orf48-202ENST00000409860 CMSS1Q9BQ75 279 aaKnown RBP17■□□□□ 0.31
C4orf48-202ENST00000409860 RIMS4Q9H426 269 aaPredicted RBP17■□□□□ 0.31
C4orf48-202ENST00000409860 ZMAT3Q9HA38 289 aaKnown RBP17■□□□□ 0.31
C4orf48-202ENST00000409860 A3GALT2U3KPV4 340 aa17■□□□□ 0.31
C4orf48-202ENST00000409860 ACANP16112 2415 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 ABCA1O95477 2261 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 CTDSP2O14595 271 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 XRCC3O43542 346 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 GSTP1P09211 210 aaKnown RBP16.99■□□□□ 0.31
C4orf48-202ENST00000409860 CD3GP09693 182 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 ELK1P19419 428 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 PAX8Q06710 450 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 METTL11BQ5VVY1 283 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 CLEC9AQ6UXN8 241 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 TCF23Q7RTU1 214 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 GAPTQ8N292 157 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 ZNF565Q8N9K5 539 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 CORO2AQ92828 525 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 CYYR1Q96J86 154 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 ZNF714Q96N38 554 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 SMR3AQ99954 134 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 MMP27Q9H306 513 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 C12orf4Q9NQ89 552 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.99■□□□□ 0.31
C4orf48-202ENST00000409860 YAE1D1Q9NRH1 226 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 TRAPPC2LQ9UL33 140 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 KCNK7Q9Y2U2 307 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 KPTNQ9Y664 436 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.99■□□□□ 0.31
C4orf48-202ENST00000409860 CSPG4Q6UVK1 2322 aa16.99■□□□□ 0.31
C4orf48-202ENST00000409860 hCG_1809904A0A1W2PP81 198 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 A0A1W2PPE2 198 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 A0A1W2PR64 198 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 A0A1W2PRV1 198 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 MEX3AA1L020 520 aaKnown RBP16.98■□□□□ 0.31
C4orf48-202ENST00000409860 M0R1W7 72 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 LY6G6DO95868 133 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 ZNF728P0DKX0 622 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 CCL3L1P16619 93 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 TALDO1P37837 337 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 MNDAP41218 407 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 ARF6P62330 175 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 ARFRP1Q13795 201 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 ZNF260Q3ZCT1 412 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 LAX1Q8IWV1 398 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 IZUMO1Q8IYV9 350 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 OR13A1Q8NGR1 328 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 OR4K15Q8NH41 348 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 MRPL30Q8TCC3 161 aaKnown RBP16.98■□□□□ 0.31
C4orf48-202ENST00000409860 MRGPRDQ8TDS7 321 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 CCDC107Q8WV48 283 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 GAL3ST2Q9H3Q3 398 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 C7orf69Q9H7B7 122 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 TAS2R3Q9NYW6 316 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 AUP1Q9Y679 476 aa16.98■□□□□ 0.31
C4orf48-202ENST00000409860 DOCK11Q5JSL3 2073 aa16.97■□□□□ 0.31
C4orf48-202ENST00000409860 TMEM235A6NFC5 223 aa16.97■□□□□ 0.31
C4orf48-202ENST00000409860 GNG2P59768 71 aa16.97■□□□□ 0.31
C4orf48-202ENST00000409860 PNLIPRP3Q17RR3 467 aa16.97■□□□□ 0.31
C4orf48-202ENST00000409860 C6orf183Q5T699 404 aa16.97■□□□□ 0.31
C4orf48-202ENST00000409860 HACD4Q5VWC8 232 aa16.97■□□□□ 0.31
C4orf48-202ENST00000409860 OLFML2AQ68BL7 652 aa16.97■□□□□ 0.31
C4orf48-202ENST00000409860 TRAT1Q6PIZ9 186 aa16.97■□□□□ 0.31
C4orf48-202ENST00000409860 MOB1BQ7L9L4 216 aa16.97■□□□□ 0.31
C4orf48-202ENST00000409860 DTX3Q8N9I9 347 aa16.97■□□□□ 0.31
C4orf48-202ENST00000409860 MIXL1Q9H2W2 232 aa16.97■□□□□ 0.31
C4orf48-202ENST00000409860 EXTL2Q9UBQ6 330 aa16.97■□□□□ 0.31
C4orf48-202ENST00000409860 TRAV39A0A0B4J263 110 aa16.96■□□□□ 0.31
C4orf48-202ENST00000409860 ZNF729A6NN14 1252 aaPredicted RBP16.96■□□□□ 0.31
C4orf48-202ENST00000409860 POM121CA8CG34 1229 aa16.96■□□□□ 0.31
C4orf48-202ENST00000409860 A8MV72 311 aaPredicted RBP16.96■□□□□ 0.31
C4orf48-202ENST00000409860 NAPSAO96009 420 aa16.96■□□□□ 0.31
C4orf48-202ENST00000409860 GZMHP20718 246 aa16.96■□□□□ 0.31
C4orf48-202ENST00000409860 TAS2R20P59543 309 aa16.96■□□□□ 0.31
C4orf48-202ENST00000409860 PITPNAQ00169 270 aa16.96■□□□□ 0.31
C4orf48-202ENST00000409860 C1orf122Q6ZSJ8 110 aa16.96■□□□□ 0.31
C4orf48-202ENST00000409860 SETD6Q8TBK2 473 aa16.96■□□□□ 0.31
C4orf48-202ENST00000409860 WDFY2Q96P53 400 aa16.96■□□□□ 0.31
C4orf48-202ENST00000409860 HDHD3Q9BSH5 251 aaPredicted RBP16.96■□□□□ 0.31
C4orf48-202ENST00000409860 TMPRSS13Q9BYE2 586 aa16.96■□□□□ 0.31
C4orf48-202ENST00000409860 AUNIPQ9H7T9 357 aa16.96■□□□□ 0.31
C4orf48-202ENST00000409860 KCNIP1Q9NZI2 227 aa16.96■□□□□ 0.31
C4orf48-202ENST00000409860 YLPM1P49750 1951 aaKnown RBP16.95■□□□□ 0.3
C4orf48-202ENST00000409860 TRBV6-6A0A0A6YYG2 114 aa16.95■□□□□ 0.3
C4orf48-202ENST00000409860 TOX4O94842 621 aa16.95■□□□□ 0.3
C4orf48-202ENST00000409860 RBP4P02753 201 aa16.95■□□□□ 0.3
C4orf48-202ENST00000409860 S100A5P33763 92 aa16.95■□□□□ 0.3
C4orf48-202ENST00000409860 DLX6P56179 175 aa16.95■□□□□ 0.3
C4orf48-202ENST00000409860 CR1LQ2VPA4 569 aa16.95■□□□□ 0.3
C4orf48-202ENST00000409860 CNPY1Q3B7I2 92 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms