RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 KCNE4Q8WWG9 221 aa16.73■□□□□ 0.27
COL13A1-205ENST00000398978 IL1F10Q8WWZ1 152 aa16.73■□□□□ 0.27
COL13A1-205ENST00000398978 NIT2Q9NQR4 276 aa16.73■□□□□ 0.27
COL13A1-205ENST00000398978 GTF3C1Q12789 2109 aa16.73■□□□□ 0.27
COL13A1-205ENST00000398978 UCP3P55916 312 aa16.73■□□□□ 0.27
COL13A1-205ENST00000398978 B2MP61769 119 aa16.73■□□□□ 0.27
COL13A1-205ENST00000398978 ZFP36L1Q07352 338 aaKnown RBP16.73■□□□□ 0.27
COL13A1-205ENST00000398978 Q9N2K0 584 aa16.73■□□□□ 0.27
COL13A1-205ENST00000398978 TCFL5Q9UL49 500 aa16.73■□□□□ 0.27
COL13A1-205ENST00000398978 AGAP20933 346 aa16.73■□□□□ 0.27
COL13A1-205ENST00000398978 UCP2P55851 309 aa16.73■□□□□ 0.27
COL13A1-205ENST00000398978 PCBD1P61457 104 aa16.73■□□□□ 0.27
COL13A1-205ENST00000398978 SPSB3Q6PJ21 355 aa16.73■□□□□ 0.27
COL13A1-205ENST00000398978 ZNF561Q8N587 486 aa16.73■□□□□ 0.27
COL13A1-205ENST00000398978 IL36GQ9NZH8 169 aa16.73■□□□□ 0.27
COL13A1-205ENST00000398978 PCSK5Q92824 1860 aa16.73■□□□□ 0.27
COL13A1-205ENST00000398978 NTN3O00634 580 aaPredicted RBP16.72■□□□□ 0.27
COL13A1-205ENST00000398978 RD3LP0DJH9 198 aa16.72■□□□□ 0.27
COL13A1-205ENST00000398978 RND3P61587 244 aa16.72■□□□□ 0.27
COL13A1-205ENST00000398978 RPS23P62266 143 aaKnown RBP16.72■□□□□ 0.27
COL13A1-205ENST00000398978 TMEM267Q0VDI3 215 aaPredicted RBP16.72■□□□□ 0.27
COL13A1-205ENST00000398978 HMGN3Q15651 99 aa16.72■□□□□ 0.27
COL13A1-205ENST00000398978 TRIM61Q5EBN2 209 aa16.72■□□□□ 0.27
COL13A1-205ENST00000398978 MRPL21Q7Z2W9 205 aaKnown RBP16.72■□□□□ 0.27
COL13A1-205ENST00000398978 PBDC1Q9BVG4 233 aa16.72■□□□□ 0.27
COL13A1-205ENST00000398978 C1QTNF5Q9BXJ0 243 aa16.72■□□□□ 0.27
COL13A1-205ENST00000398978 C11orf1Q9H5F2 150 aa16.72■□□□□ 0.27
COL13A1-205ENST00000398978 CYB561P49447 251 aa16.72■□□□□ 0.27
COL13A1-205ENST00000398978 SPATA46Q5T0L3 261 aa16.72■□□□□ 0.27
COL13A1-205ENST00000398978 ZNF100Q8IYN0 542 aa16.72■□□□□ 0.27
COL13A1-205ENST00000398978 PLA2G3Q9NZ20 509 aa16.72■□□□□ 0.27
COL13A1-205ENST00000398978 ATPIF1Q9UII2 106 aa16.72■□□□□ 0.27
COL13A1-205ENST00000398978 STRAPQ9Y3F4 350 aaKnown RBP16.72■□□□□ 0.27
COL13A1-205ENST00000398978 RBFOX3A6NFN3 312 aa16.71■□□□□ 0.27
COL13A1-205ENST00000398978 OR2C1O95371 312 aa16.71■□□□□ 0.27
COL13A1-205ENST00000398978 TLE1Q04724 770 aa16.71■□□□□ 0.27
COL13A1-205ENST00000398978 TCEAL6Q6IPX3 200 aa16.71■□□□□ 0.27
COL13A1-205ENST00000398978 TCEAL3Q969E4 200 aa16.71■□□□□ 0.27
COL13A1-205ENST00000398978 WRBO00258 174 aa16.71■□□□□ 0.27
COL13A1-205ENST00000398978 CPNE4Q96A23 557 aaPredicted RBP16.71■□□□□ 0.27
COL13A1-205ENST00000398978 SIGLEC12Q96PQ1 595 aa16.71■□□□□ 0.27
COL13A1-205ENST00000398978 LRFN1Q9P244 771 aa16.71■□□□□ 0.27
COL13A1-205ENST00000398978 OR8U8P0C7N1 319 aa16.71■□□□□ 0.26
COL13A1-205ENST00000398978 RPS10P46783 165 aaKnown RBP16.71■□□□□ 0.26
COL13A1-205ENST00000398978 OR1J1Q8NGS3 322 aa16.71■□□□□ 0.26
COL13A1-205ENST00000398978 THOC3Q96J01 351 aaKnown RBP16.71■□□□□ 0.26
COL13A1-205ENST00000398978 PLEKHF2Q9H8W4 249 aa16.71■□□□□ 0.26
COL13A1-205ENST00000398978 CYTIPO60759 359 aa16.7■□□□□ 0.26
COL13A1-205ENST00000398978 LMO1P25800 156 aa16.7■□□□□ 0.26
COL13A1-205ENST00000398978 CYB561D1Q8N8Q1 229 aa16.7■□□□□ 0.26
COL13A1-205ENST00000398978 CT55Q8WUE5 264 aa16.7■□□□□ 0.26
COL13A1-205ENST00000398978 BCL2L14Q9BZR8 327 aa16.7■□□□□ 0.26
COL13A1-205ENST00000398978 LYRM2Q9NU23 88 aaPredicted RBP16.7■□□□□ 0.26
COL13A1-205ENST00000398978 CDS2O95674 445 aa16.7■□□□□ 0.26
COL13A1-205ENST00000398978 COMMD1Q8N668 190 aa16.7■□□□□ 0.26
COL13A1-205ENST00000398978 PLPPR1Q8TBJ4 325 aa16.7■□□□□ 0.26
COL13A1-205ENST00000398978 DOCK11Q5JSL3 2073 aa16.7■□□□□ 0.26
COL13A1-205ENST00000398978 TRAPPC2LH3BP13 241 aa16.69■□□□□ 0.26
COL13A1-205ENST00000398978 UBE2CO00762 179 aa16.69■□□□□ 0.26
COL13A1-205ENST00000398978 GFRA1P56159 465 aa16.69■□□□□ 0.26
COL13A1-205ENST00000398978 ZXDAP98168 799 aa16.69■□□□□ 0.26
COL13A1-205ENST00000398978 ZNF266Q14584 549 aa16.69■□□□□ 0.26
COL13A1-205ENST00000398978 ZDHHC23Q8IYP9 409 aa16.69■□□□□ 0.26
COL13A1-205ENST00000398978 IL22RA1Q8N6P7 574 aa16.69■□□□□ 0.26
COL13A1-205ENST00000398978 REPIN1Q9BWE0 567 aaKnown RBP16.69■□□□□ 0.26
COL13A1-205ENST00000398978 FAM86C1Q9NVL1 165 aa16.69■□□□□ 0.26
COL13A1-205ENST00000398978 H3BQ15 152 aa16.69■□□□□ 0.26
COL13A1-205ENST00000398978 DNPH1O43598 174 aa16.69■□□□□ 0.26
COL13A1-205ENST00000398978 YIF1AO95070 293 aa16.69■□□□□ 0.26
COL13A1-205ENST00000398978 S100A9P06702 114 aaKnown RBP16.69■□□□□ 0.26
COL13A1-205ENST00000398978 RAB5CP51148 216 aa16.69■□□□□ 0.26
COL13A1-205ENST00000398978 FOXO1Q12778 655 aa16.69■□□□□ 0.26
COL13A1-205ENST00000398978 RAB39BQ96DA2 213 aa16.69■□□□□ 0.26
COL13A1-205ENST00000398978 TMEM56Q96MV1 263 aa16.69■□□□□ 0.26
COL13A1-205ENST00000398978 TMEM56-RWDD3S4R434 201 aa16.69■□□□□ 0.26
COL13A1-205ENST00000398978 CLN5O75503 358 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 RHBDL1O75783 438 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 NAPSAO96009 420 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 RIPPLY2Q5TAB7 128 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 SPSB4Q96A44 273 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 TAAR3PQ9P1P4 343 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 CHD3Q12873 2000 aaKnown RBP16.68■□□□□ 0.26
COL13A1-205ENST00000398978 PITX3O75364 302 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 IAPPP10997 89 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 PSG2P11465 335 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 ZNF16P17020 682 aaPredicted RBP16.68■□□□□ 0.26
COL13A1-205ENST00000398978 TAGLN2P37802 199 aaKnown RBP16.68■□□□□ 0.26
COL13A1-205ENST00000398978 MAGEA5P43359 124 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 FGF12P61328 243 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 LINC00696Q6ZRV3 163 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 WDR5BQ86VZ2 330 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 THNSL2Q86YJ6 484 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 RNASE11Q8TAA1 199 aaKnown RBP16.68■□□□□ 0.26
COL13A1-205ENST00000398978 PSMF1Q92530 271 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 PRDM14Q9GZV8 571 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 C12orf49Q9H741 205 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 OR1A1Q9P1Q5 309 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 ERRFI1Q9UJM3 462 aaPredicted RBP16.68■□□□□ 0.26
COL13A1-205ENST00000398978 TRBV23-1A0A0A0MS06 115 aa16.68■□□□□ 0.26
COL13A1-205ENST00000398978 RAB1AP62820 205 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms