RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 BTBD17A6NE02 478 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 H3BQ15 152 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 PPIHO43447 177 aaKnown RBP13.45□□□□□ -0.26
HOXA3-202ENST00000396352 SRP19P09132 144 aaKnown RBP13.45□□□□□ -0.26
HOXA3-202ENST00000396352 ITGA3P26006 1051 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 GPM6AP51674 278 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 GFRA1P56159 465 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 VAMP2P63027 116 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 RUNX1Q01196 453 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 TSC22D1Q15714 1073 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 NIT2Q9NQR4 276 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 CCL28Q9NRJ3 127 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 RNF115Q9Y4L5 304 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 LIPGQ9Y5X9 500 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 NXPH3O95157 252 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 SLC34A2O95436 690 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 VDAC1P21796 283 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 NRN1LQ496H8 165 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 SAXO1Q8IYX7 474 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 CPNE4Q96A23 557 aaPredicted RBP13.45□□□□□ -0.26
HOXA3-202ENST00000396352 TMEM45BQ96B21 275 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 MTCH1Q9NZJ7 389 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 TAAR3PQ9P1P4 343 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 HSPB6O14558 160 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 PAX9P55771 341 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 BAXQ07812 192 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 TRA2AQ13595 282 aaKnown RBP eCLIP13.45□□□□□ -0.26
HOXA3-202ENST00000396352 ICAM4Q14773 271 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 TMEM217Q8N7C4 229 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 RAB39BQ96DA2 213 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 PRDM6Q9NQX0 595 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 SIT1Q9Y3P8 196 aa13.45□□□□□ -0.26
HOXA3-202ENST00000396352 CCDC163A0A0D9SF12 145 aa13.44□□□□□ -0.26
HOXA3-202ENST00000396352 HSPA12AO43301 675 aa13.44□□□□□ -0.26
HOXA3-202ENST00000396352 CEACAM1P13688 526 aa13.44□□□□□ -0.26
HOXA3-202ENST00000396352 MMP9P14780 707 aa13.44□□□□□ -0.26
HOXA3-202ENST00000396352 IL22RA1Q8N6P7 574 aa13.44□□□□□ -0.26
HOXA3-202ENST00000396352 FREM1Q5H8C1 2179 aa13.44□□□□□ -0.26
HOXA3-202ENST00000396352 SLC33A1O00400 549 aaPredicted RBP13.44□□□□□ -0.26
HOXA3-202ENST00000396352 CCL2P13500 99 aa13.44□□□□□ -0.26
HOXA3-202ENST00000396352 ZNF154Q13106 437 aa13.44□□□□□ -0.26
HOXA3-202ENST00000396352 OR5D13Q8NGL4 314 aa13.44□□□□□ -0.26
HOXA3-202ENST00000396352 GNPNAT1Q96EK6 184 aaPredicted RBP13.44□□□□□ -0.26
HOXA3-202ENST00000396352 ATP23Q9Y6H3 246 aa13.44□□□□□ -0.26
HOXA3-202ENST00000396352 H0Y980 276 aa13.44□□□□□ -0.26
HOXA3-202ENST00000396352 H0YL77 283 aa13.44□□□□□ -0.26
HOXA3-202ENST00000396352 CHST1O43916 411 aa13.44□□□□□ -0.26
HOXA3-202ENST00000396352 FBP1P09467 338 aa13.44□□□□□ -0.26
HOXA3-202ENST00000396352 GDF1P27539 372 aa13.44□□□□□ -0.26
HOXA3-202ENST00000396352 CEACAM21Q3KPI0 293 aa13.44□□□□□ -0.26
HOXA3-202ENST00000396352 ZNF295-AS1Q8N0V1 137 aa13.44□□□□□ -0.26
HOXA3-202ENST00000396352 HIPK2Q9H2X6 1198 aa13.44□□□□□ -0.26
HOXA3-202ENST00000396352 MRPS18CQ9Y3D5 142 aaKnown RBP13.44□□□□□ -0.26
HOXA3-202ENST00000396352 ZNF503-AS2A6NEH8 195 aa13.43□□□□□ -0.26
HOXA3-202ENST00000396352 ZNF727A8MUV8 499 aa13.43□□□□□ -0.26
HOXA3-202ENST00000396352 TNFSF12O43508 249 aa13.43□□□□□ -0.26
HOXA3-202ENST00000396352 SCAF4O95104 1147 aaKnown RBP13.43□□□□□ -0.26
HOXA3-202ENST00000396352 CFIP05156 583 aa13.43□□□□□ -0.26
HOXA3-202ENST00000396352 EIF2S3P41091 472 aaKnown RBP13.43□□□□□ -0.26
HOXA3-202ENST00000396352 ARF1P84077 181 aaKnown RBP13.43□□□□□ -0.26
HOXA3-202ENST00000396352 PCSK4Q6UW60 755 aa13.43□□□□□ -0.26
HOXA3-202ENST00000396352 A0A0G2JRQ6 117 aa13.43□□□□□ -0.26
HOXA3-202ENST00000396352 IFNA17P01571 189 aa13.43□□□□□ -0.26
HOXA3-202ENST00000396352 CCNOP22674 350 aa13.43□□□□□ -0.26
HOXA3-202ENST00000396352 OTX2P32243 289 aa13.43□□□□□ -0.26
HOXA3-202ENST00000396352 MPV17LQ2QL34 196 aa13.43□□□□□ -0.26
HOXA3-202ENST00000396352 ZNF506Q5JVG8 444 aa13.43□□□□□ -0.26
HOXA3-202ENST00000396352 ACER2Q5QJU3 275 aa13.43□□□□□ -0.26
HOXA3-202ENST00000396352 C20orf204Q6ZNR8 217 aa13.43□□□□□ -0.26
HOXA3-202ENST00000396352 CYB561D1Q8N8Q1 229 aa13.43□□□□□ -0.26
HOXA3-202ENST00000396352 IL22RA2Q969J5 263 aa13.43□□□□□ -0.26
HOXA3-202ENST00000396352 ATP5SQ99766 215 aa13.43□□□□□ -0.26
HOXA3-202ENST00000396352 UNKLQ9H9P5 680 aaKnown RBP13.43□□□□□ -0.26
HOXA3-202ENST00000396352 NOSIPQ9Y314 301 aaKnown RBP13.43□□□□□ -0.26
HOXA3-202ENST00000396352 A0A096LPE4 126 aa13.42□□□□□ -0.26
HOXA3-202ENST00000396352 KIR2DS1A0A191URI9 304 aa13.42□□□□□ -0.26
HOXA3-202ENST00000396352 A0A1W2PPZ6 126 aa13.42□□□□□ -0.26
HOXA3-202ENST00000396352 PGLYRP1O75594 196 aaPredicted RBP13.42□□□□□ -0.26
HOXA3-202ENST00000396352 KIR2DS4P43632 304 aa13.42□□□□□ -0.26
HOXA3-202ENST00000396352 KIR2DS1Q14954 304 aa13.42□□□□□ -0.26
HOXA3-202ENST00000396352 RNPS1Q15287 305 aaKnown RBP13.42□□□□□ -0.26
HOXA3-202ENST00000396352 ZDHHC23Q8IYP9 409 aa13.42□□□□□ -0.26
HOXA3-202ENST00000396352 CLDND2Q8NHS1 167 aa13.42□□□□□ -0.26
HOXA3-202ENST00000396352 TCTEX1D2Q8WW35 142 aa13.42□□□□□ -0.26
HOXA3-202ENST00000396352 OR51M1Q9H341 326 aa13.42□□□□□ -0.26
HOXA3-202ENST00000396352 TCFL5Q9UL49 500 aa13.42□□□□□ -0.26
HOXA3-202ENST00000396352 IGKV3D-15A0A087WSY6 115 aa13.42□□□□□ -0.26
HOXA3-202ENST00000396352 A0A087WWC5 75 aa13.42□□□□□ -0.26
HOXA3-202ENST00000396352 TXNL1O43396 289 aa13.42□□□□□ -0.26
HOXA3-202ENST00000396352 SS18L1O75177 396 aaPredicted RBP13.42□□□□□ -0.26
HOXA3-202ENST00000396352 HSPB1P04792 205 aaKnown RBP13.42□□□□□ -0.26
HOXA3-202ENST00000396352 NCMAPQ5T1S8 102 aa13.42□□□□□ -0.26
HOXA3-202ENST00000396352 C9orf135Q5VTT2 229 aa13.42□□□□□ -0.26
HOXA3-202ENST00000396352 MRPL30Q8TCC3 161 aaKnown RBP13.42□□□□□ -0.26
HOXA3-202ENST00000396352 PRRG4Q9BZD6 226 aa13.42□□□□□ -0.26
HOXA3-202ENST00000396352 COL27A1Q8IZC6 1860 aaPredicted RBP13.42□□□□□ -0.26
HOXA3-202ENST00000396352 C5orf49A4QMS7 147 aa13.42□□□□□ -0.26
HOXA3-202ENST00000396352 F10P00742 488 aa13.42□□□□□ -0.26
HOXA3-202ENST00000396352 MMP24Q9Y5R2 645 aa13.42□□□□□ -0.26
HOXA3-202ENST00000396352 DOCK10Q96BY6 2186 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms