RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 PIP4P1Q86T03 277 aa15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 DEFB124Q8NES8 71 aa15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 OR8G5Q8NG78 346 aa15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 KCNE4Q8WWG9 221 aa15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 SPSB4Q96A44 273 aa15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 SPIN2AQ99865 258 aa15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 SPIN2BQ9BPZ2 258 aa15.75■□□□□ 0.11
PCDHA1-202ENST00000394633 MMP7P09237 267 aaPredicted RBP15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 PCBD1P61457 104 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 DCAF12Q5T6F0 453 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 SP5Q6BEB4 398 aaPredicted RBP15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 HEPN1Q6WQI6 88 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 Q6ZS49 121 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 C1QL4Q86Z23 238 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 Q8NFD4 153 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 OR5C1Q8NGR4 320 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 STRADBQ9C0K7 418 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 SLC25A31Q9H0C2 315 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 Q9N2K0 584 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 IGKV1D-13A0A0B4J2D9 117 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 C9J4A7 227 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 TXNL1O43396 289 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 TMEM50AO95807 157 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 SCTP09683 121 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 RFPL3SP0C7P2 107 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 IGKV1-13P0DP09 117 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 BCL3P20749 454 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 DYNLT3P51808 116 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 RIPPLY2Q5TAB7 128 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 TIPARPQ7Z3E1 657 aaKnown RBP15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 GAPTQ8N292 157 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 CPEB3Q8NE35 698 aaKnown RBP15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 OR2Y1Q8NGV0 311 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 OR10D3Q8NH80 312 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 SNIP1Q8TAD8 396 aaKnown RBP15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 ADGRG7Q96K78 797 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 HS3ST6Q96QI5 342 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 C1QTNF5Q9BXJ0 243 aa15.74■□□□□ 0.11
PCDHA1-202ENST00000394633 C9orf172C9J069 976 aa15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 CST7O76096 145 aa15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 MT-CO3P00414 261 aa15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 SRP19P09132 144 aaKnown RBP15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 JMJD7P0C870 316 aa15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 EPHA1P21709 976 aa15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 EIF2S3P41091 472 aaKnown RBP15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 NBL1P41271 181 aa15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 CLDN15P56746 228 aa15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 VAMP2P63027 116 aa15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 HERPUD1Q15011 391 aa15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 HAGHQ16775 308 aa15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 NMSQ5H8A3 153 aa15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 PLPPR1Q8TBJ4 325 aa15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 TCTEX1D2Q8WW35 142 aa15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 MUCL1Q96DR8 90 aa15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 ABHD14BQ96IU4 210 aa15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 SIGLEC12Q96PQ1 595 aa15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 FGF23Q9GZV9 251 aaPredicted RBP15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 FOXJ2Q9P0K8 574 aa15.73■□□□□ 0.11
PCDHA1-202ENST00000394633 SLC22A20A6NK97 555 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 H3BQ15 152 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 HSD17B6O14756 317 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 PPIHO43447 177 aaKnown RBP15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 NAPSAO96009 420 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 OR2V1Q8NHB1 315 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 POM121Q96HA1 1249 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 CRIM1Q9NZV1 1036 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 KIAA1456Q9P272 454 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 LIPGQ9Y5X9 500 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 CLEC18AA5D8T8 446 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 ZNF727A8MUV8 499 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 ZNF732B4DXR9 585 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 HSPA12AO43301 675 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 IFNA17P01571 189 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 TK1P04183 234 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 P04436 131 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 RUNX1Q01196 453 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 ID3Q02535 119 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 WIPI1Q5MNZ9 446 aaPredicted RBP15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 CLEC18CQ8NCF0 446 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 RAB39BQ96DA2 213 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 OR51M1Q9H341 326 aa15.72■□□□□ 0.11
PCDHA1-202ENST00000394633 SPAARA0A1B0GVQ0 90 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 FAM90A10PA6NDY2 464 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 BTBD17A6NE02 478 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 FAM90A18PA6NE21 464 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 FAM90A16PA6NEW6 464 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 FAM90A20PA6NIJ5 464 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 FAM90A8PA6NJQ4 464 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 FAM90A7PA6NKC0 464 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 FAM90A22PA8MWA6 464 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 FAM90A12PA8MX19 464 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 FAM90A5PA8MXJ8 464 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 FAM90A23PA8MXZ1 464 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 SLC33A1O00400 549 aaPredicted RBP15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 ZNHIT1O43257 154 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 NXPH3O95157 252 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 FAM90A15PP0C7V4 464 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 FAM90A13PP0C7W8 464 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 FAM90A14PP0C7W9 464 aa15.71■□□□□ 0.11
PCDHA1-202ENST00000394633 FAM90A24PP0C7X0 464 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms