RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 SERPINE3A8MV23 424 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 M0R143 59 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 ST8SIA3O43173 380 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 XRCC2O43543 280 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 TK1P04183 234 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 ATP6V0CP27449 155 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 OR3A4PP47883 348 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 TDGF1P3P51864 188 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 FOXF1Q12946 379 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 TMEM187Q14656 261 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 ARL6IP1Q15041 203 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 SLC16A14Q7RTX9 510 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 RPS19BP1Q86WX3 136 aaKnown RBP9.63□□□□□ -0.87
CUX1-204ENST00000393824 LINC00346Q8IVM7 164 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 FBXL14Q8N1E6 418 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 NAXEQ8NCW5 288 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 GPR119Q8TDV5 335 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 THOC3Q96J01 351 aaKnown RBP9.63□□□□□ -0.87
CUX1-204ENST00000393824 SPACA5Q96QH8 159 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 ABHD14AQ9BUJ0 271 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 GPR84Q9NQS5 396 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 CENPMQ9NSP4 180 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 VAX2Q9UIW0 290 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 CHCHD2Q9Y6H1 151 aaPredicted RBP9.63□□□□□ -0.87
CUX1-204ENST00000393824 PTPRQQ9UMZ3 2332 aa9.63□□□□□ -0.87
CUX1-204ENST00000393824 A0A0G2JMM0 328 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 A0A1B0GU03 582 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 A0A1W2PPB8 328 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 FAM230AA0A1W2PPH8 454 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 A0A1W2PRS3 328 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 KIR3DP1A8MWS1 328 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 NPIPA5E9PKD4 350 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 ITGB1BP1O14713 200 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 HSPA12AO43301 675 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 DIRAS3O95661 229 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 NUDT14O95848 222 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 CYB5R3P00387 301 aaPredicted RBP9.62□□□□□ -0.87
CUX1-204ENST00000393824 OPN1MWP04001 364 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 OPN1MW2P0DN77 364 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 OPN1MW3P0DN78 364 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 ZNF20P17024 532 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 CEBPGP53567 150 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 RTL6Q6ICC9 239 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 SLC25A26Q70HW3 274 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 NOXO1Q8NFA2 376 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 OR1P1Q8NH06 330 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 OR4X1Q8NH49 305 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 CLDND2Q8NHS1 167 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 SLAMF6Q96DU3 332 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 SPACA9Q96E40 222 aaPredicted RBP9.62□□□□□ -0.87
CUX1-204ENST00000393824 ZNF2Q9BSG1 426 aaPredicted RBP9.62□□□□□ -0.87
CUX1-204ENST00000393824 AK3Q9UIJ7 227 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 NPIPA1Q9UND3 350 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 A8MXE2 369 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 MS4A18H0YCH9 400 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 IGHEP01854 428 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 CCL3P10147 92 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 FUT3P21217 361 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 CD82P27701 267 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 DUSP1P28562 367 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 MLF1P58340 268 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 ERVFC1-1P60608 527 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 EWSR1Q01844 656 aaKnown RBP eCLIP9.62□□□□□ -0.872e-6■■■□□ 16.3
CUX1-204ENST00000393824 TAF9Q16594 264 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 MS4A18Q3C1V0 323 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 DMRTA1Q5VZB9 504 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 ZFP62Q8NB50 900 aaPredicted RBP9.62□□□□□ -0.87
CUX1-204ENST00000393824 SSC4DQ8WTU2 575 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 TMEM234Q8WY98 164 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 DNAJA3Q96EY1 480 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 BOD1Q96IK1 185 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 SRD5A3Q9H8P0 318 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 PROK2Q9HC23 129 aa9.62□□□□□ -0.87
CUX1-204ENST00000393824 RCL1Q9Y2P8 373 aaKnown RBP9.62□□□□□ -0.87
CUX1-204ENST00000393824 TPRP12270 2363 aaKnown RBP9.62□□□□□ -0.87
CUX1-204ENST00000393824 CPAMD8Q8IZJ3 1885 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 ZNF705GA8MUZ8 300 aaPredicted RBP9.61□□□□□ -0.87
CUX1-204ENST00000393824 GEMIN2O14893 280 aaKnown RBP9.61□□□□□ -0.87
CUX1-204ENST00000393824 SERPINA7P05543 415 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 SFTPDP35247 375 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 CSNK1A1P48729 337 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 PDLIM4P50479 330 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 RBX1P62877 108 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 HSF1Q00613 529 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 FBXW12Q6X9E4 464 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 H1FNTQ75WM6 255 aaPredicted RBP9.61□□□□□ -0.87
CUX1-204ENST00000393824 OR10A7Q8NGE5 316 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 OR14L1PQ8NHC6 308 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 RNF138Q8WVD3 245 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 C18orf12Q96KH6 178 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 SYT3Q9BQG1 590 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 PECRQ9BY49 303 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 C11orf1Q9H5F2 150 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 KLHL13Q9P2N7 655 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 ITPR1Q14643 2758 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 IGKV1D-8A0A087WSZ0 117 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 ZNF732B4DXR9 585 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 HBE1P02100 147 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 ZNF43P17038 809 aa9.61□□□□□ -0.87
CUX1-204ENST00000393824 ALDH3B1P43353 468 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 220.5 ms