RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 RPS23P62266 143 aaKnown RBP16.14■□□□□ 0.17
CBX1-202ENST00000393408 TSC22D1Q15714 1073 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 MPV17LQ2QL34 196 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 CEACAM21Q3KPI0 293 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 HIKESHIQ53FT3 197 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 MAFAQ8NHW3 353 aaPredicted RBP16.14■□□□□ 0.17
CBX1-202ENST00000393408 CCL28Q9NRJ3 127 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 MTCH1Q9NZJ7 389 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 KIR2DS1A0A191URI9 304 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 BTBD17A6NE02 478 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 HSD17B6O14756 317 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 CCNOP22674 350 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 KIR2DS4P43632 304 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 KIR2DS1Q14954 304 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 ADAM5Q6NVV9 412 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 ZDHHC23Q8IYP9 409 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 LINC00470Q9BZP3 86 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 PRDM6Q9NQX0 595 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 CST7O76096 145 aa16.13■□□□□ 0.17
CBX1-202ENST00000393408 CCL2P13500 99 aa16.13■□□□□ 0.17
CBX1-202ENST00000393408 EPHA1P21709 976 aa16.13■□□□□ 0.17
CBX1-202ENST00000393408 CYB561P49447 251 aa16.13■□□□□ 0.17
CBX1-202ENST00000393408 BAXQ07812 192 aa16.13■□□□□ 0.17
CBX1-202ENST00000393408 KIAA1456Q9P272 454 aa16.13■□□□□ 0.17
CBX1-202ENST00000393408 ATP23Q9Y6H3 246 aa16.13■□□□□ 0.17
CBX1-202ENST00000393408 A0A096LPE4 126 aa16.13■□□□□ 0.17
CBX1-202ENST00000393408 A0A1W2PPZ6 126 aa16.13■□□□□ 0.17
CBX1-202ENST00000393408 HSPB6O14558 160 aa16.13■□□□□ 0.17
CBX1-202ENST00000393408 F10P00742 488 aa16.13■□□□□ 0.17
CBX1-202ENST00000393408 S100A9P06702 114 aaKnown RBP16.13■□□□□ 0.17
CBX1-202ENST00000393408 ITGA3P26006 1051 aa16.13■□□□□ 0.17
CBX1-202ENST00000393408 C9orf135Q5VTT2 229 aa16.13■□□□□ 0.17
CBX1-202ENST00000393408 MRPL21Q7Z2W9 205 aaKnown RBP16.13■□□□□ 0.17
CBX1-202ENST00000393408 IL22RA1Q8N6P7 574 aa16.13■□□□□ 0.17
CBX1-202ENST00000393408 OR5D13Q8NGL4 314 aa16.13■□□□□ 0.17
CBX1-202ENST00000393408 GNPNAT1Q96EK6 184 aaPredicted RBP16.13■□□□□ 0.17
CBX1-202ENST00000393408 FREM1Q5H8C1 2179 aa16.12■□□□□ 0.17
CBX1-202ENST00000393408 C5orf49A4QMS7 147 aa16.12■□□□□ 0.17
CBX1-202ENST00000393408 H0Y980 276 aa16.12■□□□□ 0.17
CBX1-202ENST00000393408 LINC01387J3KSC0 135 aa16.12■□□□□ 0.17
CBX1-202ENST00000393408 SLC34A2O95436 690 aa16.12■□□□□ 0.17
CBX1-202ENST00000393408 HLA-HP01893 362 aa16.12■□□□□ 0.17
CBX1-202ENST00000393408 CTXN2P0C2S0 81 aa16.12■□□□□ 0.17
CBX1-202ENST00000393408 NEK7Q8TDX7 302 aa16.12■□□□□ 0.17
CBX1-202ENST00000393408 IL22RA2Q969J5 263 aa16.12■□□□□ 0.17
CBX1-202ENST00000393408 TNRC18O15417 2968 aaPredicted RBP16.12■□□□□ 0.17
CBX1-202ENST00000393408 TRAPPC2LH3BP13 241 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 OR2C1O95371 312 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 SERPINA7P05543 415 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 SRP19P09132 144 aaKnown RBP16.11■□□□□ 0.17
CBX1-202ENST00000393408 OR8U8P0C7N1 319 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 ZNF806P0C7X5 589 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 OR2B8PP59922 312 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 TMEM217Q8N7C4 229 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 ZNF251Q9BRH9 671 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 PRRG4Q9BZD6 226 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 RNF115Q9Y4L5 304 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 DOCK10Q96BY6 2186 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 B4E171 279 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 CHST1O43916 411 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 CEACAM1P13688 526 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 TSPAN7P41732 249 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 PAX9P55771 341 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 C1QL4Q86Z23 238 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 MKXQ8IYA7 352 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 CMTM1Q8IZ96 169 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 UNKLQ9H9P5 680 aaKnown RBP16.11■□□□□ 0.17
CBX1-202ENST00000393408 TAAR3PQ9P1P4 343 aa16.11■□□□□ 0.17
CBX1-202ENST00000393408 ZNF503-AS2A6NEH8 195 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 SS18L1O75177 396 aaPredicted RBP16.1■□□□□ 0.17
CBX1-202ENST00000393408 PGLYRP1O75594 196 aaPredicted RBP16.1■□□□□ 0.17
CBX1-202ENST00000393408 NXPH3O95157 252 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 COX5BP10606 129 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 FOXG1P55316 489 aaPredicted RBP16.1■□□□□ 0.17
CBX1-202ENST00000393408 RUNX1Q01196 453 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 ZNF154Q13106 437 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 PCSK4Q6UW60 755 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 HEPN1Q6WQI6 88 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 MRPL30Q8TCC3 161 aaKnown RBP16.1■□□□□ 0.17
CBX1-202ENST00000393408 PSMF1Q92530 271 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 APOBEC3DQ96AK3 386 aaPredicted RBP16.1■□□□□ 0.17
CBX1-202ENST00000393408 TCEAL7Q9BRU2 100 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 LIPGQ9Y5X9 500 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 H3BQ15 152 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 AP4M1O00189 453 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 SLC33A1O00400 549 aaPredicted RBP16.1■□□□□ 0.17
CBX1-202ENST00000393408 TNFSF12O43508 249 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 SYNGR1O43759 233 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 NQO2P16083 231 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 ICAM4Q14773 271 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 HAGHQ16775 308 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 PEAR1Q5VY43 1037 aaPredicted RBP16.1■□□□□ 0.17
CBX1-202ENST00000393408 CT55Q8WUE5 264 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 MUCL1Q96DR8 90 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 IER2Q9BTL4 223 aa16.1■□□□□ 0.17
CBX1-202ENST00000393408 BOKQ9UMX3 212 aaPredicted RBP16.1■□□□□ 0.17
CBX1-202ENST00000393408 TDGF1P13385 188 aa16.09■□□□□ 0.17
CBX1-202ENST00000393408 LHX2P50458 406 aa16.09■□□□□ 0.17
CBX1-202ENST00000393408 SRYQ05066 204 aa16.09■□□□□ 0.17
CBX1-202ENST00000393408 SSPNQ14714 243 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms