RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 NME2P22392 152 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 RAB5BP61020 215 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 IL13RA1P78552 427 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 CALHM1Q8IU99 346 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 SLC17A5Q9NRA2 495 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 VSIG4Q9Y279 399 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 AUP1Q9Y679 476 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 CLEC18AA5D8T8 446 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 SIAH2O43255 324 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 LILRA1O75019 489 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 BRI3O95415 125 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 ARG1P05089 322 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 HIST1H1DP16402 221 aaKnown RBP9.32□□□□□ -0.92
NEDD9-201ENST00000379433 TNFSF10P50591 281 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 PLP2Q04941 152 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 OR2T2Q6IF00 324 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 DRAM2Q6UX65 266 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 CLEC18BQ6UXF7 455 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 CXorf67Q86X51 503 aaPredicted RBP9.32□□□□□ -0.92
NEDD9-201ENST00000379433 TMEM178AQ8NBL3 297 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 CLEC18CQ8NCF0 446 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 CHST5Q9GZS9 411 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 GEMIN7Q9H840 131 aaKnown RBP9.32□□□□□ -0.92
NEDD9-201ENST00000379433 RHOFQ9HBH0 211 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 A0A1B0GV72 72 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 A0A1W2PPV4 95 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 DISC1C4P0D8 188 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 CNIH1O95406 144 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 SULT1A3P0DMM9 295 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 SULT1A4P0DMN0 295 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 RPA2P15927 270 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 TMEM33P57088 247 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 ERVS71-1P61550 626 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 PPP1R1AQ13522 171 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 TECTBQ96PL2 329 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 GPHA2Q96T91 129 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 ZNF442Q9H7R0 627 aa9.32□□□□□ -0.92
NEDD9-201ENST00000379433 IGKV1D-8A0A087WSZ0 117 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 A0A1B0GUH1 482 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 TMEM14DPA8MWL7 114 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 CST2P09228 141 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 SNRPCP09234 159 aaKnown RBP9.31□□□□□ -0.92
NEDD9-201ENST00000379433 FAM3AP98173 230 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 DHRS2Q13268 280 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 LGALSLQ3ZCW2 172 aaPredicted RBP9.31□□□□□ -0.92
NEDD9-201ENST00000379433 ARSJQ5FYB0 599 aaPredicted RBP9.31□□□□□ -0.92
NEDD9-201ENST00000379433 C17orf78Q8N4C9 275 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 STEAP2Q8NFT2 490 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 OR56B1Q8NGI3 324 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 OR13C8Q8NGS7 320 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 OR5H2Q8NGV7 314 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 GLYATL2Q8WU03 294 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.31□□□□□ -0.92
NEDD9-201ENST00000379433 SLC7A11Q9UPY5 501 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 SLC33A1O00400 549 aaPredicted RBP9.31□□□□□ -0.92
NEDD9-201ENST00000379433 HPNP05981 417 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 UCP1P25874 307 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 PCBD1P61457 104 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 QRFPP83859 136 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 PRSS33Q8NF86 280 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 OR10W1Q8NGF6 305 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 MITD1Q8WV92 249 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 AQP3Q92482 292 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 RAB1CQ92928 201 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 C1orf147Q96MC9 270 aaPredicted RBP9.31□□□□□ -0.92
NEDD9-201ENST00000379433 HS3ST6Q96QI5 342 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 ARL6Q9H0F7 186 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 ST3GAL6Q9Y274 331 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 MEIKINA0A087WXM9 373 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 TRAV39A0A0B4J263 110 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 OR6C6A6NF89 314 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 LGALS8O00214 317 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 CRYGSP22914 178 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 CD34P28906 385 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 AVPI1Q5T686 147 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 ZNF626Q68DY1 528 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 MDS2Q8NDY4 140 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 OR2AK2Q8NG84 335 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 PHB2Q99623 299 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 CLEC4MQ9H2X3 399 aaPredicted RBP9.31□□□□□ -0.92
NEDD9-201ENST00000379433 SEBOXQ9HB31 216 aaPredicted RBP9.31□□□□□ -0.92
NEDD9-201ENST00000379433 ZNF71Q9NQZ8 489 aaPredicted RBP9.31□□□□□ -0.92
NEDD9-201ENST00000379433 PIEZO1Q92508 2521 aa9.31□□□□□ -0.92
NEDD9-201ENST00000379433 F8VVB4 439 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 F8VWA3 439 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 K7EM74 188 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 CRYBA4P53673 196 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 FOXC1Q12948 553 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 ALKAL2Q6UX46 152 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 MYPOPQ86VE0 399 aaPredicted RBP9.3□□□□□ -0.92
NEDD9-201ENST00000379433 ZNF611Q8N823 705 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 BOLLQ8N9W6 283 aaKnown RBP9.3□□□□□ -0.92
NEDD9-201ENST00000379433 HARBI1Q96MB7 349 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 YAE1D1Q9NRH1 226 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 ELOA3CA0A087WX78 387 aaPredicted RBP9.3□□□□□ -0.92
NEDD9-201ENST00000379433 HS3ST1O14792 307 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 TM4SF5O14894 197 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 CFDP00746 253 aaPredicted RBP9.3□□□□□ -0.92
NEDD9-201ENST00000379433 CD5P06127 495 aa9.3□□□□□ -0.92
NEDD9-201ENST00000379433 CA6P23280 308 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms