RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 ZNF100Q8IYN0 542 aa15.54■□□□□ 0.08
SF1-203ENST00000377387 TMEM105Q8N8V8 129 aa15.54■□□□□ 0.08
SF1-203ENST00000377387 LILRB1Q8NHL6 650 aaPredicted RBP15.54■□□□□ 0.08
SF1-203ENST00000377387 CPNE4Q96A23 557 aaPredicted RBP15.54■□□□□ 0.08
SF1-203ENST00000377387 THOC3Q96J01 351 aaKnown RBP15.54■□□□□ 0.08
SF1-203ENST00000377387 IFT22Q9H7X7 185 aa15.54■□□□□ 0.08
SF1-203ENST00000377387 FAM86C1Q9NVL1 165 aa15.54■□□□□ 0.08
SF1-203ENST00000377387 ZNF391Q9UJN7 358 aa15.54■□□□□ 0.08
SF1-203ENST00000377387 TTC28Q96AY4 2481 aa15.53■□□□□ 0.08
SF1-203ENST00000377387 TXNL1O43396 289 aa15.53■□□□□ 0.08
SF1-203ENST00000377387 CYTIPO60759 359 aa15.53■□□□□ 0.08
SF1-203ENST00000377387 IFNA4P05014 189 aa15.53■□□□□ 0.08
SF1-203ENST00000377387 RIPPLY2Q5TAB7 128 aa15.53■□□□□ 0.08
SF1-203ENST00000377387 C20orf204Q6ZNR8 217 aa15.53■□□□□ 0.08
SF1-203ENST00000377387 LIPGQ9Y5X9 500 aa15.53■□□□□ 0.08
SF1-203ENST00000377387 SPENQ96T58 3664 aaKnown RBP15.53■□□□□ 0.08
SF1-203ENST00000377387 IGKV1-6A0A0C4DH72 117 aa15.53■□□□□ 0.08
SF1-203ENST00000377387 TRAPPC2LH3BP13 241 aa15.53■□□□□ 0.08
SF1-203ENST00000377387 LILRA1O75019 489 aa15.53■□□□□ 0.08
SF1-203ENST00000377387 MYPOPQ86VE0 399 aaPredicted RBP15.53■□□□□ 0.08
SF1-203ENST00000377387 WDR5BQ86VZ2 330 aa15.53■□□□□ 0.08
SF1-203ENST00000377387 ZNF561Q8N587 486 aa15.53■□□□□ 0.08
SF1-203ENST00000377387 COMMD1Q8N668 190 aa15.53■□□□□ 0.08
SF1-203ENST00000377387 CT55Q8WUE5 264 aa15.53■□□□□ 0.08
SF1-203ENST00000377387 PLEKHF2Q9H8W4 249 aa15.53■□□□□ 0.08
SF1-203ENST00000377387 PLA2G3Q9NZ20 509 aa15.53■□□□□ 0.08
SF1-203ENST00000377387 MMP24Q9Y5R2 645 aa15.53■□□□□ 0.08
SF1-203ENST00000377387 URGCP-MRPS24S4R325 110 aa15.53■□□□□ 0.08
SF1-203ENST00000377387 NBEAQ8NFP9 2946 aa15.52■□□□□ 0.08
SF1-203ENST00000377387 C5orf52A6NGY3 159 aa15.52■□□□□ 0.07
SF1-203ENST00000377387 CDS2O95674 445 aa15.52■□□□□ 0.07
SF1-203ENST00000377387 RAB5CP51148 216 aa15.52■□□□□ 0.07
SF1-203ENST00000377387 ZNF266Q14584 549 aa15.52■□□□□ 0.07
SF1-203ENST00000377387 DCAF12Q5T6F0 453 aa15.52■□□□□ 0.07
SF1-203ENST00000377387 ZDHHC23Q8IYP9 409 aa15.52■□□□□ 0.07
SF1-203ENST00000377387 SIGLEC12Q96PQ1 595 aa15.52■□□□□ 0.07
SF1-203ENST00000377387 EGLN1Q9GZT9 426 aa15.52■□□□□ 0.07
SF1-203ENST00000377387 EP300Q09472 2414 aaPredicted RBP15.52■□□□□ 0.07
SF1-203ENST00000377387 FOLR2P14207 255 aa15.51■□□□□ 0.07
SF1-203ENST00000377387 SPATA46Q5T0L3 261 aa15.51■□□□□ 0.07
SF1-203ENST00000377387 MKXQ8IYA7 352 aa15.51■□□□□ 0.07
SF1-203ENST00000377387 OR1J1Q8NGS3 322 aa15.51■□□□□ 0.07
SF1-203ENST00000377387 RNASE11Q8TAA1 199 aaKnown RBP15.51■□□□□ 0.07
SF1-203ENST00000377387 REPIN1Q9BWE0 567 aaKnown RBP15.51■□□□□ 0.07
SF1-203ENST00000377387 BCL2L14Q9BZR8 327 aa15.51■□□□□ 0.07
SF1-203ENST00000377387 RBFOX3A6NFN3 312 aa15.51■□□□□ 0.07
SF1-203ENST00000377387 ARGFXA6NJG6 315 aa15.51■□□□□ 0.07
SF1-203ENST00000377387 PRSS44E7EML9 344 aa15.51■□□□□ 0.07
SF1-203ENST00000377387 S100A9P06702 114 aaKnown RBP15.51■□□□□ 0.07
SF1-203ENST00000377387 DUSP3P51452 185 aaPredicted RBP15.51■□□□□ 0.07
SF1-203ENST00000377387 UCP2P55851 309 aa15.51■□□□□ 0.07
SF1-203ENST00000377387 GFRA1P56159 465 aa15.51■□□□□ 0.07
SF1-203ENST00000377387 FOXO1Q12778 655 aa15.51■□□□□ 0.07
SF1-203ENST00000377387 PRDM14Q9GZV8 571 aa15.51■□□□□ 0.07
SF1-203ENST00000377387 A0A0G2JRQ6 117 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 OR2C1O95371 312 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 FGF12P61328 243 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 RND3P61587 244 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 RAB1AP62820 205 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 HNF4GQ14541 408 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 SLC25A24Q6NUK1 477 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 LINC00696Q6ZRV3 163 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 IL22RA1Q8N6P7 574 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 SPSB4Q96A44 273 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 HIST1H2AAQ96QV6 131 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 NIT2Q9NQR4 276 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 ATPIF1Q9UII2 106 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 H0YL77 283 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 LAMTOR5O43504 91 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 TMEM267Q0VDI3 215 aaPredicted RBP15.5■□□□□ 0.07
SF1-203ENST00000377387 TRA2AQ13595 282 aaKnown RBP eCLIP15.5■□□□□ 0.078e-8■□□□□ 9.4
SF1-203ENST00000377387 NCMAPQ5T1S8 102 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 ODF3L1Q8IXM7 274 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 PSMF1Q92530 271 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 SPIN2AQ99865 258 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 SPIN2BQ9BPZ2 258 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 PLSCR2Q9NRY7 297 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 LYRM2Q9NU23 88 aaPredicted RBP15.5■□□□□ 0.07
SF1-203ENST00000377387 HSPA12AO43301 675 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 ZNF16P17020 682 aaPredicted RBP15.5■□□□□ 0.07
SF1-203ENST00000377387 AGAP20933 346 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 MAGEA5P43359 124 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 ZXDAP98168 799 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 SPSB3Q6PJ21 355 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 MED12LQ86YW9 2145 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 TMEM56Q96MV1 263 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 GUCD1Q96NT3 240 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 SLC25A31Q9H0C2 315 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 C12orf49Q9H741 205 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 ERRFI1Q9UJM3 462 aaPredicted RBP15.5■□□□□ 0.07
SF1-203ENST00000377387 TMEM56-RWDD3S4R434 201 aa15.5■□□□□ 0.07
SF1-203ENST00000377387 NAPSAO96009 420 aa15.49■□□□□ 0.07
SF1-203ENST00000377387 RPS10P46783 165 aaKnown RBP15.49■□□□□ 0.07
SF1-203ENST00000377387 SRPXP78539 464 aa15.49■□□□□ 0.07
SF1-203ENST00000377387 ZNF343Q6P1L6 599 aa15.49■□□□□ 0.07
SF1-203ENST00000377387 CMTM1Q8IZ96 169 aa15.49■□□□□ 0.07
SF1-203ENST00000377387 LOXL2Q9Y4K0 774 aa15.49■□□□□ 0.07
SF1-203ENST00000377387 RPS23P62266 143 aaKnown RBP15.49■□□□□ 0.07
SF1-203ENST00000377387 CEACAM21Q3KPI0 293 aa15.49■□□□□ 0.07
SF1-203ENST00000377387 C6orf15Q6UXA7 325 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms